Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc194A0A140LIT1 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc194A0A140LIT1 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc194A0A140LIT1 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc194A0A140LIT1 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc194A0A140LIT1 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc194A0A140LIT1 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc194A0A140LIT1 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.35□□□□□ -0.43
Ccdc194A0A140LIT1 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc194A0A140LIT1 Gm38092-201ENSMUST00000195600 653 ntBASIC12.35□□□□□ -0.43
Ccdc194A0A140LIT1 Gm5035-201ENSMUST00000215581 927 ntBASIC12.35□□□□□ -0.43
Ccdc194A0A140LIT1 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc194A0A140LIT1 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc194A0A140LIT1 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc194A0A140LIT1 Gm10268-201ENSMUST00000085340 555 ntBASIC12.35□□□□□ -0.43
Ccdc194A0A140LIT1 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccdc194A0A140LIT1 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc194A0A140LIT1 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc194A0A140LIT1 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc194A0A140LIT1 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc194A0A140LIT1 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ccdc194A0A140LIT1 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc194A0A140LIT1 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc194A0A140LIT1 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc194A0A140LIT1 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ccdc194A0A140LIT1 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc194A0A140LIT1 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccdc194A0A140LIT1 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Ccdc194A0A140LIT1 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccdc194A0A140LIT1 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Ccdc194A0A140LIT1 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Gm7029-201ENSMUST00000173226 450 ntBASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Gm26927-201ENSMUST00000182385 965 ntBASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Gm27390-201ENSMUST00000184516 176 ntBASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Gm7561-201ENSMUST00000211203 886 ntBASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccdc194A0A140LIT1 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Ccdc194A0A140LIT1 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Ccdc194A0A140LIT1 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Ccdc194A0A140LIT1 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc194A0A140LIT1 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc194A0A140LIT1 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Ccdc194A0A140LIT1 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc194A0A140LIT1 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc194A0A140LIT1 Daam2-202ENSMUST00000224595 1926 ntBASIC12.33□□□□□ -0.44
Ccdc194A0A140LIT1 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc194A0A140LIT1 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc194A0A140LIT1 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ccdc194A0A140LIT1 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Ccdc194A0A140LIT1 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.33□□□□□ -0.44
Ccdc194A0A140LIT1 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.33□□□□□ -0.44
Ccdc194A0A140LIT1 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Ccdc194A0A140LIT1 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc194A0A140LIT1 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Ccdc194A0A140LIT1 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.33□□□□□ -0.44
Ccdc194A0A140LIT1 Gm5904-201ENSMUST00000210286 865 ntBASIC12.33□□□□□ -0.44
Ccdc194A0A140LIT1 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc194A0A140LIT1 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.33□□□□□ -0.44
Ccdc194A0A140LIT1 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc194A0A140LIT1 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccdc194A0A140LIT1 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms