Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Mup-ps23-201ENSMUST00000118063 630 ntBASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Gm22331-201ENSMUST00000158066 136 ntBASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Gm24196-201ENSMUST00000179161 110 ntBASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Gm37042-201ENSMUST00000193816 581 ntBASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Gm8099-201ENSMUST00000200510 742 ntBASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Trav5-4A0A075B652 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Gm13127-201ENSMUST00000118978 1389 ntBASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Gm22121-201ENSMUST00000175148 54 ntBASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Gm27839-201ENSMUST00000184242 106 ntBASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Wdyhv1-206ENSMUST00000227142 786 ntBASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Gm43858-201ENSMUST00000199418 1778 ntBASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Trav5-4A0A075B652 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav5-4A0A075B652 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav5-4A0A075B652 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav5-4A0A075B652 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav5-4A0A075B652 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav5-4A0A075B652 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav5-4A0A075B652 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav5-4A0A075B652 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav5-4A0A075B652 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav5-4A0A075B652 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Trav5-4A0A075B652 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 311.1 ms