Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Prpf40aQ9R1C7 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf40aQ9R1C7 Pck2-205ENSMUST00000226352 2784 ntBASIC13.72□□□□□ -0.21
Prpf40aQ9R1C7 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.72□□□□□ -0.21
Prpf40aQ9R1C7 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf40aQ9R1C7 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf40aQ9R1C7 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf40aQ9R1C7 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf40aQ9R1C7 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.72□□□□□ -0.21
Prpf40aQ9R1C7 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf40aQ9R1C7 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Prpf40aQ9R1C7 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.72□□□□□ -0.21
Prpf40aQ9R1C7 Gm8062-201ENSMUST00000139696 444 ntBASIC13.72□□□□□ -0.21
Prpf40aQ9R1C7 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf40aQ9R1C7 Gm24548-201ENSMUST00000158650 108 ntBASIC13.72□□□□□ -0.21
Prpf40aQ9R1C7 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.72□□□□□ -0.21
Prpf40aQ9R1C7 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf40aQ9R1C7 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf40aQ9R1C7 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.72□□□□□ -0.21
Prpf40aQ9R1C7 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.72□□□□□ -0.21
Prpf40aQ9R1C7 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Prpf40aQ9R1C7 Gm43858-201ENSMUST00000199418 1778 ntBASIC13.72□□□□□ -0.21
Prpf40aQ9R1C7 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf40aQ9R1C7 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf40aQ9R1C7 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf40aQ9R1C7 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf40aQ9R1C7 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf40aQ9R1C7 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.72□□□□□ -0.21
Prpf40aQ9R1C7 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf40aQ9R1C7 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf40aQ9R1C7 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf40aQ9R1C7 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf40aQ9R1C7 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf40aQ9R1C7 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Prpf40aQ9R1C7 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 Gm12502-201ENSMUST00000120197 444 ntBASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 Gm16296-201ENSMUST00000159905 325 ntBASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 Gm17420-201ENSMUST00000164753 153 ntBASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Prpf40aQ9R1C7 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Prpf40aQ9R1C7 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Prpf40aQ9R1C7 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Prpf40aQ9R1C7 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Prpf40aQ9R1C7 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Prpf40aQ9R1C7 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Prpf40aQ9R1C7 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Prpf40aQ9R1C7 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Prpf40aQ9R1C7 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prpf40aQ9R1C7 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Prpf40aQ9R1C7 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prpf40aQ9R1C7 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prpf40aQ9R1C7 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prpf40aQ9R1C7 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prpf40aQ9R1C7 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Prpf40aQ9R1C7 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Prpf40aQ9R1C7 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms