Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Scn11aQ9R053 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Scn11aQ9R053 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn11aQ9R053 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn11aQ9R053 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Scn11aQ9R053 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn11aQ9R053 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scn11aQ9R053 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn11aQ9R053 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Scn11aQ9R053 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn11aQ9R053 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn11aQ9R053 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn11aQ9R053 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn11aQ9R053 AC158355.1-201ENSMUST00000215895 1705 ntBASIC14.51□□□□□ -0.09
Scn11aQ9R053 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn11aQ9R053 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn11aQ9R053 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC14.51□□□□□ -0.09
Scn11aQ9R053 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Scn11aQ9R053 Gm6485-201ENSMUST00000160676 439 ntBASIC14.51□□□□□ -0.09
Scn11aQ9R053 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Scn11aQ9R053 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC14.51□□□□□ -0.09
Scn11aQ9R053 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scn11aQ9R053 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC14.51□□□□□ -0.09
Scn11aQ9R053 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scn11aQ9R053 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn11aQ9R053 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn11aQ9R053 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC14.51□□□□□ -0.09
Scn11aQ9R053 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn11aQ9R053 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn11aQ9R053 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn11aQ9R053 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Scn11aQ9R053 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scn11aQ9R053 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Scn11aQ9R053 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Scn11aQ9R053 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.51□□□□□ -0.09
Scn11aQ9R053 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC14.5□□□□□ -0.09
Scn11aQ9R053 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn11aQ9R053 AC126799.1-201ENSMUST00000221976 246 ntBASIC14.5□□□□□ -0.09
Scn11aQ9R053 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.5□□□□□ -0.09
Scn11aQ9R053 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn11aQ9R053 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Acot6-202ENSMUST00000222921 3622 ntBASIC14.5□□□□□ -0.09
Scn11aQ9R053 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Gm11246-201ENSMUST00000120880 345 ntBASIC14.5□□□□□ -0.09
Scn11aQ9R053 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Mt1-202ENSMUST00000211807 1085 ntBASIC14.5□□□□□ -0.09
Scn11aQ9R053 Gm18636-201ENSMUST00000218846 1066 ntBASIC14.5□□□□□ -0.09
Scn11aQ9R053 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Scn11aQ9R053 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Scn11aQ9R053 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Scn11aQ9R053 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn11aQ9R053 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn11aQ9R053 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC14.49□□□□□ -0.09
Scn11aQ9R053 Gm13910-201ENSMUST00000121752 1428 ntBASIC14.49□□□□□ -0.09
Scn11aQ9R053 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn11aQ9R053 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn11aQ9R053 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.49□□□□□ -0.09
Scn11aQ9R053 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn11aQ9R053 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn11aQ9R053 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn11aQ9R053 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Scn11aQ9R053 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC14.49□□□□□ -0.09
Scn11aQ9R053 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn11aQ9R053 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Scn11aQ9R053 Gm15207-201ENSMUST00000119259 442 ntBASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms