Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trem1Q9JKE2 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.12□□□□□ -0.63
Trem1Q9JKE2 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trem1Q9JKE2 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trem1Q9JKE2 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trem1Q9JKE2 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trem1Q9JKE2 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trem1Q9JKE2 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trem1Q9JKE2 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Trem1Q9JKE2 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trem1Q9JKE2 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Trem1Q9JKE2 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trem1Q9JKE2 Gm15770-201ENSMUST00000117498 584 ntBASIC11.12□□□□□ -0.63
Trem1Q9JKE2 Gm15467-201ENSMUST00000120582 445 ntBASIC11.12□□□□□ -0.63
Trem1Q9JKE2 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC11.12□□□□□ -0.63
Trem1Q9JKE2 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.12□□□□□ -0.63
Trem1Q9JKE2 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
Trem1Q9JKE2 Gm25911-201ENSMUST00000157621 56 ntBASIC11.12□□□□□ -0.63
Trem1Q9JKE2 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC11.12□□□□□ -0.63
Trem1Q9JKE2 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trem1Q9JKE2 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.12□□□□□ -0.63
Trem1Q9JKE2 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC11.12□□□□□ -0.63
Trem1Q9JKE2 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Trem1Q9JKE2 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trem1Q9JKE2 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trem1Q9JKE2 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trem1Q9JKE2 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trem1Q9JKE2 Gm15500-202ENSMUST00000071641 1019 ntBASIC11.12□□□□□ -0.63
Trem1Q9JKE2 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Trem1Q9JKE2 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trem1Q9JKE2 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trem1Q9JKE2 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.12□□□□□ -0.63
Trem1Q9JKE2 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trem1Q9JKE2 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trem1Q9JKE2 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trem1Q9JKE2 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trem1Q9JKE2 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trem1Q9JKE2 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trem1Q9JKE2 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trem1Q9JKE2 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trem1Q9JKE2 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trem1Q9JKE2 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Trem1Q9JKE2 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trem1Q9JKE2 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Gm42602-201ENSMUST00000200288 3224 ntBASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC11.11□□□□□ -0.63
Trem1Q9JKE2 St5-203ENSMUST00000084738 3161 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trem1Q9JKE2 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Gm13437-201ENSMUST00000122434 1981 ntBASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Gm25287-201ENSMUST00000103846 110 ntBASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Gm22918-201ENSMUST00000103855 110 ntBASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Gm6912-201ENSMUST00000117218 544 ntBASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Gm4995-201ENSMUST00000117247 432 ntBASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trem1Q9JKE2 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Mir6990-201ENSMUST00000183724 91 ntBASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trem1Q9JKE2 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trem1Q9JKE2 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trem1Q9JKE2 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trem1Q9JKE2 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trem1Q9JKE2 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trem1Q9JKE2 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trem1Q9JKE2 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trem1Q9JKE2 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trem1Q9JKE2 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trem1Q9JKE2 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trem1Q9JKE2 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trem1Q9JKE2 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trem1Q9JKE2 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trem1Q9JKE2 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trem1Q9JKE2 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms