Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Gm6973-201ENSMUST00000117080 721 ntBASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Ighv1-25-201ENSMUST00000195638 345 ntBASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Smco4Q9JIS3 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Gm42934-201ENSMUST00000196920 1345 ntBASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Mir125a-201ENSMUST00000083545 68 ntBASIC9.91□□□□□ -0.82
Smco4Q9JIS3 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Smco4Q9JIS3 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smco4Q9JIS3 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Smco4Q9JIS3 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smco4Q9JIS3 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Smco4Q9JIS3 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Smco4Q9JIS3 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Smco4Q9JIS3 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Smco4Q9JIS3 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms