Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tubb3Q9ERD7 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Gm6023-201ENSMUST00000118217 606 ntBASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Gm14723-201ENSMUST00000118686 215 ntBASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Gm27516-201ENSMUST00000184237 98 ntBASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Gm43822-201ENSMUST00000200285 476 ntBASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Gm35960-201ENSMUST00000202712 767 ntBASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Gm3961-201ENSMUST00000204425 994 ntBASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Gm4768-201ENSMUST00000206199 686 ntBASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Gm8227-201ENSMUST00000223306 571 ntBASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tubb3Q9ERD7 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Tubb3Q9ERD7 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Tubb3Q9ERD7 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tubb3Q9ERD7 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tubb3Q9ERD7 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.36□□□□□ -0.43
Tubb3Q9ERD7 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Tubb3Q9ERD7 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tubb3Q9ERD7 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Tubb3Q9ERD7 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tubb3Q9ERD7 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.36□□□□□ -0.43
Tubb3Q9ERD7 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tubb3Q9ERD7 Gm12363-201ENSMUST00000122250 668 ntBASIC12.36□□□□□ -0.43
Tubb3Q9ERD7 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.36□□□□□ -0.43
Tubb3Q9ERD7 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Tubb3Q9ERD7 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.36□□□□□ -0.43
Tubb3Q9ERD7 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tubb3Q9ERD7 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tubb3Q9ERD7 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Tubb3Q9ERD7 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tubb3Q9ERD7 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Tubb3Q9ERD7 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tubb3Q9ERD7 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tubb3Q9ERD7 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tubb3Q9ERD7 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tubb3Q9ERD7 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Tubb3Q9ERD7 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.36□□□□□ -0.43
Tubb3Q9ERD7 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tubb3Q9ERD7 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tubb3Q9ERD7 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tubb3Q9ERD7 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Tubb3Q9ERD7 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms