Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm15595-201ENSMUST00000120840 961 ntBASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 Gm20392-201ENSMUST00000173047 701 ntBASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 Gm10731-201ENSMUST00000181171 448 ntBASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 Gm44958-201ENSMUST00000203734 736 ntBASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Nkx2-4Q9EQM3 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-4Q9EQM3 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Nkx2-4Q9EQM3 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-4Q9EQM3 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-4Q9EQM3 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-4Q9EQM3 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-4Q9EQM3 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.73□□□□□ -0.37
Nkx2-4Q9EQM3 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-4Q9EQM3 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-4Q9EQM3 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-4Q9EQM3 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC12.73□□□□□ -0.37
Nkx2-4Q9EQM3 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-4Q9EQM3 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Nkx2-4Q9EQM3 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-4Q9EQM3 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.73□□□□□ -0.37
Nkx2-4Q9EQM3 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.73□□□□□ -0.37
Nkx2-4Q9EQM3 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-4Q9EQM3 Gm5621-201ENSMUST00000187303 640 ntBASIC12.73□□□□□ -0.37
Nkx2-4Q9EQM3 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.73□□□□□ -0.37
Nkx2-4Q9EQM3 Gm5298-201ENSMUST00000201122 892 ntBASIC12.73□□□□□ -0.37
Nkx2-4Q9EQM3 Gm2875-201ENSMUST00000211333 360 ntBASIC12.73□□□□□ -0.37
Nkx2-4Q9EQM3 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-4Q9EQM3 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Nkx2-4Q9EQM3 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-4Q9EQM3 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Nkx2-4Q9EQM3 Mir483-201ENSMUST00000093631 73 ntBASIC12.73□□□□□ -0.37
Nkx2-4Q9EQM3 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-4Q9EQM3 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.73□□□□□ -0.37
Nkx2-4Q9EQM3 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-4Q9EQM3 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Nkx2-4Q9EQM3 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-4Q9EQM3 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-4Q9EQM3 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-4Q9EQM3 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-4Q9EQM3 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-4Q9EQM3 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Nkx2-4Q9EQM3 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nkx2-4Q9EQM3 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Gm11663-201ENSMUST00000117888 290 ntBASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Gm7722-201ENSMUST00000120646 741 ntBASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Mir8115-201ENSMUST00000184992 119 ntBASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Gm17877-201ENSMUST00000192578 814 ntBASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Gm43186-201ENSMUST00000198130 824 ntBASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Gm8325-201ENSMUST00000099086 453 ntBASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nkx2-4Q9EQM3 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nkx2-4Q9EQM3 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms