Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chmp5Q9D7S9 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Chmp5Q9D7S9 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Chmp5Q9D7S9 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC15.53■□□□□ 0.08
Chmp5Q9D7S9 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Chmp5Q9D7S9 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chmp5Q9D7S9 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chmp5Q9D7S9 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC15.52■□□□□ 0.08
Chmp5Q9D7S9 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chmp5Q9D7S9 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chmp5Q9D7S9 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Chmp5Q9D7S9 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC15.52■□□□□ 0.08
Chmp5Q9D7S9 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chmp5Q9D7S9 AC154639.1-201ENSMUST00000224393 2849 ntBASIC15.52■□□□□ 0.08
Chmp5Q9D7S9 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chmp5Q9D7S9 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Chmp5Q9D7S9 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chmp5Q9D7S9 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC15.52■□□□□ 0.08
Chmp5Q9D7S9 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Chmp5Q9D7S9 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Chmp5Q9D7S9 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chmp5Q9D7S9 Gm12203-201ENSMUST00000118235 598 ntBASIC15.52■□□□□ 0.08
Chmp5Q9D7S9 Gm12209-201ENSMUST00000120089 596 ntBASIC15.52■□□□□ 0.08
Chmp5Q9D7S9 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Chmp5Q9D7S9 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chmp5Q9D7S9 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Chmp5Q9D7S9 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC15.52■□□□□ 0.08
Chmp5Q9D7S9 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Chmp5Q9D7S9 Gm2824-203ENSMUST00000226189 1228 ntBASIC15.52■□□□□ 0.08
Chmp5Q9D7S9 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chmp5Q9D7S9 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chmp5Q9D7S9 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chmp5Q9D7S9 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chmp5Q9D7S9 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC15.52■□□□□ 0.07
Chmp5Q9D7S9 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Chmp5Q9D7S9 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Chmp5Q9D7S9 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chmp5Q9D7S9 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Chmp5Q9D7S9 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chmp5Q9D7S9 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC15.52■□□□□ 0.07
Chmp5Q9D7S9 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 CT025678.1-201ENSMUST00000214795 2972 ntBASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 AC160410.1-201ENSMUST00000219298 1972 ntBASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 Rmrp-201ENSMUST00000157463 271 ntBASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 Mir6977-201ENSMUST00000184960 64 ntBASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 Gm38092-201ENSMUST00000195600 653 ntBASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 AC135669.1-201ENSMUST00000213585 412 ntBASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 AC155237.1-201ENSMUST00000226196 1279 ntBASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 AL732506.1-201ENSMUST00000226420 281 ntBASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 Gm10146-201ENSMUST00000072739 309 ntBASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 Gm43823-201ENSMUST00000197391 1808 ntBASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Chmp5Q9D7S9 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Chmp5Q9D7S9 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp5Q9D7S9 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Chmp5Q9D7S9 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC15.5■□□□□ 0.07
Chmp5Q9D7S9 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp5Q9D7S9 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp5Q9D7S9 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC15.5■□□□□ 0.07
Chmp5Q9D7S9 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp5Q9D7S9 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp5Q9D7S9 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp5Q9D7S9 Gm9361-201ENSMUST00000198695 1507 ntBASIC15.5■□□□□ 0.07
Chmp5Q9D7S9 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp5Q9D7S9 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC15.5■□□□□ 0.07
Chmp5Q9D7S9 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp5Q9D7S9 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp5Q9D7S9 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Chmp5Q9D7S9 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Chmp5Q9D7S9 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp5Q9D7S9 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp5Q9D7S9 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Chmp5Q9D7S9 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms