Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3a3Q9D554 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Gm15693-201ENSMUST00000120470 637 ntBASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3a3Q9D554 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Gm27618-201ENSMUST00000183671 60 ntBASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Gm27390-201ENSMUST00000184516 176 ntBASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.57□□□□□ -0.4
Sf3a3Q9D554 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3a3Q9D554 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.57□□□□□ -0.4
Sf3a3Q9D554 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3a3Q9D554 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sf3a3Q9D554 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.56□□□□□ -0.4
Sf3a3Q9D554 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3a3Q9D554 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Sf3a3Q9D554 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3a3Q9D554 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.56□□□□□ -0.4
Sf3a3Q9D554 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.56□□□□□ -0.4
Sf3a3Q9D554 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.56□□□□□ -0.4
Sf3a3Q9D554 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.56□□□□□ -0.4
Sf3a3Q9D554 Gm6458-201ENSMUST00000211573 635 ntBASIC12.56□□□□□ -0.4
Sf3a3Q9D554 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3a3Q9D554 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3a3Q9D554 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3a3Q9D554 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3a3Q9D554 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.56□□□□□ -0.4
Sf3a3Q9D554 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.56□□□□□ -0.4
Sf3a3Q9D554 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3a3Q9D554 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3a3Q9D554 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3a3Q9D554 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3a3Q9D554 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.56□□□□□ -0.4
Sf3a3Q9D554 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3a3Q9D554 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Sf3a3Q9D554 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3a3Q9D554 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Sf3a3Q9D554 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sf3a3Q9D554 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Sf3a3Q9D554 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Gm9630-201ENSMUST00000178304 885 ntBASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Gm17837-201ENSMUST00000186435 985 ntBASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Gm42550-201ENSMUST00000201553 960 ntBASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sf3a3Q9D554 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms