Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Gm9522-201ENSMUST00000182394 926 ntBASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Gm35960-201ENSMUST00000202712 767 ntBASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Gm8227-201ENSMUST00000223306 571 ntBASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Trim42Q9D2H5 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim42Q9D2H5 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim42Q9D2H5 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trim42Q9D2H5 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim42Q9D2H5 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim42Q9D2H5 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim42Q9D2H5 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trim42Q9D2H5 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trim42Q9D2H5 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim42Q9D2H5 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trim42Q9D2H5 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim42Q9D2H5 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.49□□□□□ -0.41
Trim42Q9D2H5 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim42Q9D2H5 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim42Q9D2H5 Gm16202-201ENSMUST00000117532 544 ntBASIC12.49□□□□□ -0.41
Trim42Q9D2H5 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.49□□□□□ -0.41
Trim42Q9D2H5 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.49□□□□□ -0.41
Trim42Q9D2H5 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim42Q9D2H5 Gm38294-201ENSMUST00000192831 381 ntBASIC12.49□□□□□ -0.41
Trim42Q9D2H5 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.49□□□□□ -0.41
Trim42Q9D2H5 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim42Q9D2H5 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.49□□□□□ -0.41
Trim42Q9D2H5 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim42Q9D2H5 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim42Q9D2H5 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim42Q9D2H5 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim42Q9D2H5 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim42Q9D2H5 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.49□□□□□ -0.41
Trim42Q9D2H5 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim42Q9D2H5 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim42Q9D2H5 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.49□□□□□ -0.41
Trim42Q9D2H5 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim42Q9D2H5 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim42Q9D2H5 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Gm15920-201ENSMUST00000118998 402 ntBASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.48□□□□□ -0.41
Trim42Q9D2H5 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 101.1 ms