Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim13Q9CYB0 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim13Q9CYB0 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Gm5866-201ENSMUST00000177881 973 ntBASIC11.51□□□□□ -0.57
Trim13Q9CYB0 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Gm2423-201ENSMUST00000074863 733 ntBASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trim13Q9CYB0 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Gm44855-201ENSMUST00000205725 362 ntBASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Gm19220-201ENSMUST00000222682 803 ntBASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Gm16372-201ENSMUST00000073088 450 ntBASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trim13Q9CYB0 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms