Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Mir6392-201ENSMUST00000184924 108 ntBASIC12.34□□□□□ -0.43
Ssu72Q9CY97 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Gm37917-201ENSMUST00000194711 392 ntBASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ssu72Q9CY97 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Ssu72Q9CY97 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ssu72Q9CY97 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ssu72Q9CY97 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssu72Q9CY97 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssu72Q9CY97 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssu72Q9CY97 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssu72Q9CY97 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssu72Q9CY97 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ssu72Q9CY97 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.33□□□□□ -0.44
Ssu72Q9CY97 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssu72Q9CY97 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssu72Q9CY97 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.33□□□□□ -0.44
Ssu72Q9CY97 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ssu72Q9CY97 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssu72Q9CY97 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.33□□□□□ -0.44
Ssu72Q9CY97 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.33□□□□□ -0.44
Ssu72Q9CY97 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.33□□□□□ -0.44
Ssu72Q9CY97 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.33□□□□□ -0.44
Ssu72Q9CY97 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.33□□□□□ -0.44
Ssu72Q9CY97 Gm4768-201ENSMUST00000206199 686 ntBASIC12.33□□□□□ -0.44
Ssu72Q9CY97 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Ssu72Q9CY97 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.33□□□□□ -0.44
Ssu72Q9CY97 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssu72Q9CY97 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssu72Q9CY97 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssu72Q9CY97 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssu72Q9CY97 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.33□□□□□ -0.44
Ssu72Q9CY97 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssu72Q9CY97 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ssu72Q9CY97 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.33□□□□□ -0.44
Ssu72Q9CY97 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssu72Q9CY97 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ssu72Q9CY97 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ssu72Q9CY97 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ssu72Q9CY97 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssu72Q9CY97 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssu72Q9CY97 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.32□□□□□ -0.44
Ssu72Q9CY97 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ssu72Q9CY97 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssu72Q9CY97 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ssu72Q9CY97 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.32□□□□□ -0.44
Ssu72Q9CY97 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ssu72Q9CY97 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.32□□□□□ -0.44
Ssu72Q9CY97 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ssu72Q9CY97 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssu72Q9CY97 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ssu72Q9CY97 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ssu72Q9CY97 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.32□□□□□ -0.44
Ssu72Q9CY97 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ssu72Q9CY97 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.32□□□□□ -0.44
Ssu72Q9CY97 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.32□□□□□ -0.44
Ssu72Q9CY97 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Ssu72Q9CY97 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Ssu72Q9CY97 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.32□□□□□ -0.44
Ssu72Q9CY97 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Ssu72Q9CY97 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssu72Q9CY97 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.32□□□□□ -0.44
Ssu72Q9CY97 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.32□□□□□ -0.44
Ssu72Q9CY97 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.32□□□□□ -0.44
Ssu72Q9CY97 Gm38671-201ENSMUST00000200573 130 ntBASIC12.32□□□□□ -0.44
Ssu72Q9CY97 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.32□□□□□ -0.44
Ssu72Q9CY97 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssu72Q9CY97 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Ssu72Q9CY97 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Ssu72Q9CY97 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.32□□□□□ -0.44
Ssu72Q9CY97 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.32□□□□□ -0.44
Ssu72Q9CY97 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms