Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpa3Q9CQ71 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpa3Q9CQ71 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpa3Q9CQ71 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.17□□□□□ -0.3
Rpa3Q9CQ71 Paupar-201ENSMUST00000194826 3482 ntBASIC13.17□□□□□ -0.3
Rpa3Q9CQ71 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rpa3Q9CQ71 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Rpa3Q9CQ71 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rpa3Q9CQ71 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpa3Q9CQ71 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpa3Q9CQ71 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpa3Q9CQ71 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpa3Q9CQ71 Gm13316-201ENSMUST00000140537 691 ntBASIC13.17□□□□□ -0.3
Rpa3Q9CQ71 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpa3Q9CQ71 Gm27023-201ENSMUST00000182372 285 ntBASIC13.17□□□□□ -0.3
Rpa3Q9CQ71 Gm38158-201ENSMUST00000194617 339 ntBASIC13.17□□□□□ -0.3
Rpa3Q9CQ71 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC13.17□□□□□ -0.3
Rpa3Q9CQ71 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.17□□□□□ -0.3
Rpa3Q9CQ71 Gm43118-201ENSMUST00000199149 775 ntBASIC13.17□□□□□ -0.3
Rpa3Q9CQ71 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpa3Q9CQ71 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpa3Q9CQ71 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Rpa3Q9CQ71 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Rpa3Q9CQ71 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rpa3Q9CQ71 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpa3Q9CQ71 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpa3Q9CQ71 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpa3Q9CQ71 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rpa3Q9CQ71 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Rpa3Q9CQ71 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpa3Q9CQ71 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpa3Q9CQ71 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rpa3Q9CQ71 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Rpa3Q9CQ71 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa3Q9CQ71 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa3Q9CQ71 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.16□□□□□ -0.3
Rpa3Q9CQ71 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa3Q9CQ71 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa3Q9CQ71 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa3Q9CQ71 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa3Q9CQ71 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.16□□□□□ -0.3
Rpa3Q9CQ71 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa3Q9CQ71 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rpa3Q9CQ71 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa3Q9CQ71 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rpa3Q9CQ71 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Rpa3Q9CQ71 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa3Q9CQ71 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa3Q9CQ71 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.16□□□□□ -0.3
Rpa3Q9CQ71 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.16□□□□□ -0.3
Rpa3Q9CQ71 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa3Q9CQ71 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.16□□□□□ -0.3
Rpa3Q9CQ71 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa3Q9CQ71 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Rpa3Q9CQ71 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa3Q9CQ71 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa3Q9CQ71 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa3Q9CQ71 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa3Q9CQ71 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa3Q9CQ71 Matn2-203ENSMUST00000226766 3252 ntBASIC13.16□□□□□ -0.3
Rpa3Q9CQ71 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa3Q9CQ71 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa3Q9CQ71 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa3Q9CQ71 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Rpa3Q9CQ71 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa3Q9CQ71 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa3Q9CQ71 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa3Q9CQ71 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa3Q9CQ71 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa3Q9CQ71 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rpa3Q9CQ71 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rpa3Q9CQ71 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpa3Q9CQ71 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rpa3Q9CQ71 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpa3Q9CQ71 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpa3Q9CQ71 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpa3Q9CQ71 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rpa3Q9CQ71 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Rpa3Q9CQ71 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpa3Q9CQ71 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpa3Q9CQ71 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rpa3Q9CQ71 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rpa3Q9CQ71 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.15□□□□□ -0.3
Rpa3Q9CQ71 Gm12058-201ENSMUST00000118614 437 ntBASIC13.15□□□□□ -0.3
Rpa3Q9CQ71 Gm13342-201ENSMUST00000121055 207 ntBASIC13.15□□□□□ -0.3
Rpa3Q9CQ71 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC13.15□□□□□ -0.3
Rpa3Q9CQ71 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC13.15□□□□□ -0.3
Rpa3Q9CQ71 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rpa3Q9CQ71 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.15□□□□□ -0.3
Rpa3Q9CQ71 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpa3Q9CQ71 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rpa3Q9CQ71 Gm29396-201ENSMUST00000185659 716 ntBASIC13.15□□□□□ -0.3
Rpa3Q9CQ71 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.15□□□□□ -0.3
Rpa3Q9CQ71 Gm37201-201ENSMUST00000191845 523 ntBASIC13.15□□□□□ -0.3
Rpa3Q9CQ71 Gm42693-201ENSMUST00000196779 631 ntBASIC13.15□□□□□ -0.3
Rpa3Q9CQ71 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rpa3Q9CQ71 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.15□□□□□ -0.3
Rpa3Q9CQ71 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rpa3Q9CQ71 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
Rpa3Q9CQ71 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms