Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Gm10548-201ENSMUST00000097631 2629 ntBASIC11.78□□□□□ -0.52
Ska1Q9CPV1 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ska1Q9CPV1 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Ska1Q9CPV1 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ska1Q9CPV1 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ska1Q9CPV1 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Ska1Q9CPV1 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ska1Q9CPV1 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Ska1Q9CPV1 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ska1Q9CPV1 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Gm11618-201ENSMUST00000117946 267 ntBASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Gm8213-201ENSMUST00000118191 441 ntBASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Gm7287-201ENSMUST00000205267 602 ntBASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ska1Q9CPV1 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Ska1Q9CPV1 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ska1Q9CPV1 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ska1Q9CPV1 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ska1Q9CPV1 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ska1Q9CPV1 AC129336.1-201ENSMUST00000220224 2277 ntBASIC11.76□□□□□ -0.53
Ska1Q9CPV1 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ska1Q9CPV1 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.76□□□□□ -0.53
Ska1Q9CPV1 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ska1Q9CPV1 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ska1Q9CPV1 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.76□□□□□ -0.53
Ska1Q9CPV1 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ska1Q9CPV1 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ska1Q9CPV1 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ska1Q9CPV1 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.76□□□□□ -0.53
Ska1Q9CPV1 Gm28693-202ENSMUST00000190758 331 ntBASIC11.76□□□□□ -0.53
Ska1Q9CPV1 Gm17794-201ENSMUST00000220252 955 ntBASIC11.76□□□□□ -0.53
Ska1Q9CPV1 Gm8227-201ENSMUST00000223306 571 ntBASIC11.76□□□□□ -0.53
Ska1Q9CPV1 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ska1Q9CPV1 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ska1Q9CPV1 Gm6180-201ENSMUST00000065243 498 ntBASIC11.76□□□□□ -0.53
Ska1Q9CPV1 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms