Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Gm13315-201ENSMUST00000120376 991 ntBASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Gm7809-201ENSMUST00000153199 742 ntBASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Gm16379-201ENSMUST00000161469 348 ntBASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Gm6222-202ENSMUST00000182143 629 ntBASIC14.17□□□□□ -0.14
Trim11Q99PQ2 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Gm8762-201ENSMUST00000193486 339 ntBASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Gm6007-201ENSMUST00000208170 823 ntBASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim11Q99PQ2 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim11Q99PQ2 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim11Q99PQ2 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim11Q99PQ2 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim11Q99PQ2 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Gm3890-201ENSMUST00000182416 207 ntBASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Gm44405-201ENSMUST00000198952 126 ntBASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Gm5781-201ENSMUST00000219792 443 ntBASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim11Q99PQ2 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim11Q99PQ2 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim11Q99PQ2 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim11Q99PQ2 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim11Q99PQ2 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim11Q99PQ2 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim11Q99PQ2 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC14.15□□□□□ -0.14
Trim11Q99PQ2 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim11Q99PQ2 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim11Q99PQ2 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim11Q99PQ2 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim11Q99PQ2 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim11Q99PQ2 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim11Q99PQ2 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim11Q99PQ2 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trim11Q99PQ2 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Trim11Q99PQ2 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim11Q99PQ2 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim11Q99PQ2 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim11Q99PQ2 Gm27731-201ENSMUST00000185192 107 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms