Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.22□□□□□ -0.29
Sf3b1Q99NB9 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sf3b1Q99NB9 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sf3b1Q99NB9 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sf3b1Q99NB9 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sf3b1Q99NB9 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Sf3b1Q99NB9 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sf3b1Q99NB9 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sf3b1Q99NB9 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sf3b1Q99NB9 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sf3b1Q99NB9 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Sf3b1Q99NB9 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sf3b1Q99NB9 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sf3b1Q99NB9 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sf3b1Q99NB9 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sf3b1Q99NB9 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.22□□□□□ -0.29
Sf3b1Q99NB9 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Sf3b1Q99NB9 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.22□□□□□ -0.29
Sf3b1Q99NB9 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sf3b1Q99NB9 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Sf3b1Q99NB9 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Sf3b1Q99NB9 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Sf3b1Q99NB9 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sf3b1Q99NB9 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.22□□□□□ -0.29
Sf3b1Q99NB9 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Sf3b1Q99NB9 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.21□□□□□ -0.29
Sf3b1Q99NB9 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3b1Q99NB9 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3b1Q99NB9 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3b1Q99NB9 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3b1Q99NB9 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3b1Q99NB9 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3b1Q99NB9 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3b1Q99NB9 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3b1Q99NB9 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Sf3b1Q99NB9 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC13.21□□□□□ -0.29
Sf3b1Q99NB9 Gm45433-201ENSMUST00000209386 247 ntBASIC13.21□□□□□ -0.29
Sf3b1Q99NB9 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3b1Q99NB9 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Sf3b1Q99NB9 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC13.21□□□□□ -0.29
Sf3b1Q99NB9 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3b1Q99NB9 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.21□□□□□ -0.29
Sf3b1Q99NB9 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3b1Q99NB9 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3b1Q99NB9 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3b1Q99NB9 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3b1Q99NB9 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.21□□□□□ -0.29
Sf3b1Q99NB9 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Sf3b1Q99NB9 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3b1Q99NB9 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sf3b1Q99NB9 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.21□□□□□ -0.3
Sf3b1Q99NB9 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sf3b1Q99NB9 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Sf3b1Q99NB9 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Sf3b1Q99NB9 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Sf3b1Q99NB9 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.21□□□□□ -0.3
Sf3b1Q99NB9 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Sf3b1Q99NB9 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Sf3b1Q99NB9 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Sf3b1Q99NB9 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b1Q99NB9 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b1Q99NB9 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b1Q99NB9 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b1Q99NB9 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b1Q99NB9 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b1Q99NB9 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC13.2□□□□□ -0.3
Sf3b1Q99NB9 Mir5120-201ENSMUST00000175020 78 ntBASIC13.2□□□□□ -0.3
Sf3b1Q99NB9 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b1Q99NB9 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b1Q99NB9 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC13.2□□□□□ -0.3
Sf3b1Q99NB9 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b1Q99NB9 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b1Q99NB9 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Sf3b1Q99NB9 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b1Q99NB9 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b1Q99NB9 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Sf3b1Q99NB9 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b1Q99NB9 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b1Q99NB9 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b1Q99NB9 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b1Q99NB9 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b1Q99NB9 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b1Q99NB9 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b1Q99NB9 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b1Q99NB9 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.2□□□□□ -0.3
Sf3b1Q99NB9 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b1Q99NB9 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b1Q99NB9 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b1Q99NB9 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.2□□□□□ -0.3
Sf3b1Q99NB9 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b1Q99NB9 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b1Q99NB9 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sf3b1Q99NB9 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3b1Q99NB9 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3b1Q99NB9 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3b1Q99NB9 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3b1Q99NB9 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC13.19□□□□□ -0.3
Sf3b1Q99NB9 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3b1Q99NB9 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sf3b1Q99NB9 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms