Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Tlr3Q99MB1 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Tlr3Q99MB1 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tlr3Q99MB1 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC13.38□□□□□ -0.27
Tlr3Q99MB1 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.37□□□□□ -0.27
Tlr3Q99MB1 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tlr3Q99MB1 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.37□□□□□ -0.27
Tlr3Q99MB1 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tlr3Q99MB1 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tlr3Q99MB1 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tlr3Q99MB1 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tlr3Q99MB1 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.37□□□□□ -0.27
Tlr3Q99MB1 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tlr3Q99MB1 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tlr3Q99MB1 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tlr3Q99MB1 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.37□□□□□ -0.27
Tlr3Q99MB1 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Tlr3Q99MB1 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tlr3Q99MB1 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Tlr3Q99MB1 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Tlr3Q99MB1 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.37□□□□□ -0.27
Tlr3Q99MB1 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.37□□□□□ -0.27
Tlr3Q99MB1 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Tlr3Q99MB1 Gm13316-201ENSMUST00000140537 691 ntBASIC13.37□□□□□ -0.27
Tlr3Q99MB1 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.37□□□□□ -0.27
Tlr3Q99MB1 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tlr3Q99MB1 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tlr3Q99MB1 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.37□□□□□ -0.27
Tlr3Q99MB1 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.37□□□□□ -0.27
Tlr3Q99MB1 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.37□□□□□ -0.27
Tlr3Q99MB1 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Tlr3Q99MB1 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Tlr3Q99MB1 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Tlr3Q99MB1 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.37□□□□□ -0.27
Tlr3Q99MB1 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tlr3Q99MB1 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tlr3Q99MB1 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tlr3Q99MB1 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tlr3Q99MB1 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Tlr3Q99MB1 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tlr3Q99MB1 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tlr3Q99MB1 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Tlr3Q99MB1 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tlr3Q99MB1 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tlr3Q99MB1 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tlr3Q99MB1 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tlr3Q99MB1 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.36□□□□□ -0.27
Tlr3Q99MB1 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tlr3Q99MB1 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tlr3Q99MB1 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tlr3Q99MB1 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.36□□□□□ -0.27
Tlr3Q99MB1 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tlr3Q99MB1 Gm12314-201ENSMUST00000118104 538 ntBASIC13.36□□□□□ -0.27
Tlr3Q99MB1 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Tlr3Q99MB1 Gm13786-201ENSMUST00000122371 333 ntBASIC13.36□□□□□ -0.27
Tlr3Q99MB1 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tlr3Q99MB1 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Tlr3Q99MB1 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.36□□□□□ -0.27
Tlr3Q99MB1 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.36□□□□□ -0.27
Tlr3Q99MB1 Gm26461-201ENSMUST00000175064 290 ntBASIC13.36□□□□□ -0.27
Tlr3Q99MB1 Gm18304-201ENSMUST00000189162 546 ntBASIC13.36□□□□□ -0.27
Tlr3Q99MB1 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.36□□□□□ -0.27
Tlr3Q99MB1 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Tlr3Q99MB1 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.36□□□□□ -0.27
Tlr3Q99MB1 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.36□□□□□ -0.27
Tlr3Q99MB1 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Tlr3Q99MB1 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Tlr3Q99MB1 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tlr3Q99MB1 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Tlr3Q99MB1 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tlr3Q99MB1 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Tlr3Q99MB1 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tlr3Q99MB1 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tlr3Q99MB1 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tlr3Q99MB1 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tlr3Q99MB1 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tlr3Q99MB1 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tlr3Q99MB1 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tlr3Q99MB1 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tlr3Q99MB1 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tlr3Q99MB1 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tlr3Q99MB1 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tlr3Q99MB1 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tlr3Q99MB1 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tlr3Q99MB1 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tlr3Q99MB1 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tlr3Q99MB1 Gm10434-201ENSMUST00000101158 471 ntBASIC13.35□□□□□ -0.27
Tlr3Q99MB1 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tlr3Q99MB1 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tlr3Q99MB1 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tlr3Q99MB1 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.35□□□□□ -0.27
Tlr3Q99MB1 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tlr3Q99MB1 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.35□□□□□ -0.27
Tlr3Q99MB1 Gm38158-201ENSMUST00000194617 339 ntBASIC13.35□□□□□ -0.27
Tlr3Q99MB1 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tlr3Q99MB1 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Tlr3Q99MB1 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tlr3Q99MB1 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tlr3Q99MB1 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tlr3Q99MB1 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms