Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Mir7677-201ENSMUST00000184226 67 ntBASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Gm42937-201ENSMUST00000197360 752 ntBASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Gm45550-201ENSMUST00000209380 946 ntBASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Gm17827-201ENSMUST00000211825 742 ntBASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Nkx6-1Q99MA9 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
Nkx6-1Q99MA9 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx6-1Q99MA9 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx6-1Q99MA9 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.71□□□□□ -0.54
Nkx6-1Q99MA9 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx6-1Q99MA9 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx6-1Q99MA9 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Nkx6-1Q99MA9 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx6-1Q99MA9 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx6-1Q99MA9 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.71□□□□□ -0.54
Nkx6-1Q99MA9 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nkx6-1Q99MA9 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Gm11989-201ENSMUST00000117240 672 ntBASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Gm7851-201ENSMUST00000117574 323 ntBASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Gm11362-201ENSMUST00000118838 850 ntBASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Rn7s6-201ENSMUST00000175005 291 ntBASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 AC099645.1-201ENSMUST00000226476 1105 ntBASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Ginm1-202ENSMUST00000065124 300 ntBASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.7□□□□□ -0.54
Nkx6-1Q99MA9 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Gm12196-201ENSMUST00000120954 262 ntBASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Gm9358-201ENSMUST00000183067 927 ntBASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Gm28324-201ENSMUST00000187913 264 ntBASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Gm9132-201ENSMUST00000210182 832 ntBASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms