Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Gm1335-201ENSMUST00000121653 386 ntBASIC12.04□□□□□ -0.48
Cstf3Q99LI7 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Gm43818-201ENSMUST00000200605 466 ntBASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cstf3Q99LI7 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Gm11964-201ENSMUST00000120982 444 ntBASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Gm5745-201ENSMUST00000183748 313 ntBASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.03□□□□□ -0.48
Cstf3Q99LI7 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.03□□□□□ -0.48
Cstf3Q99LI7 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Cstf3Q99LI7 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cstf3Q99LI7 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cstf3Q99LI7 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cstf3Q99LI7 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Cstf3Q99LI7 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cstf3Q99LI7 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cstf3Q99LI7 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Cstf3Q99LI7 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cstf3Q99LI7 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cstf3Q99LI7 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.02□□□□□ -0.48
Cstf3Q99LI7 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Cstf3Q99LI7 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Cstf3Q99LI7 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cstf3Q99LI7 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cstf3Q99LI7 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cstf3Q99LI7 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cstf3Q99LI7 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cstf3Q99LI7 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cstf3Q99LI7 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cstf3Q99LI7 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cstf3Q99LI7 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cstf3Q99LI7 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.02□□□□□ -0.49
Cstf3Q99LI7 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.02□□□□□ -0.49
Cstf3Q99LI7 Gm4984-201ENSMUST00000115987 360 ntBASIC12.02□□□□□ -0.49
Cstf3Q99LI7 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cstf3Q99LI7 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.02□□□□□ -0.49
Cstf3Q99LI7 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cstf3Q99LI7 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cstf3Q99LI7 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cstf3Q99LI7 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cstf3Q99LI7 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cstf3Q99LI7 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cstf3Q99LI7 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.02□□□□□ -0.49
Cstf3Q99LI7 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cstf3Q99LI7 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cstf3Q99LI7 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cstf3Q99LI7 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms