Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RtcbQ99LF4 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RtcbQ99LF4 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
RtcbQ99LF4 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RtcbQ99LF4 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RtcbQ99LF4 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RtcbQ99LF4 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.3■□□□□ 0.04
RtcbQ99LF4 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RtcbQ99LF4 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RtcbQ99LF4 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RtcbQ99LF4 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RtcbQ99LF4 Gm12899-201ENSMUST00000120565 551 ntBASIC15.3■□□□□ 0.04
RtcbQ99LF4 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC15.3■□□□□ 0.04
RtcbQ99LF4 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC15.3■□□□□ 0.04
RtcbQ99LF4 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC15.3■□□□□ 0.04
RtcbQ99LF4 Gm25951-201ENSMUST00000175330 64 ntBASIC15.3■□□□□ 0.04
RtcbQ99LF4 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RtcbQ99LF4 Gm37028-201ENSMUST00000194276 107 ntBASIC15.3■□□□□ 0.04
RtcbQ99LF4 Gm19166-201ENSMUST00000196041 1063 ntBASIC15.3■□□□□ 0.04
RtcbQ99LF4 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC15.3■□□□□ 0.04
RtcbQ99LF4 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RtcbQ99LF4 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC15.3■□□□□ 0.04
RtcbQ99LF4 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RtcbQ99LF4 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RtcbQ99LF4 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RtcbQ99LF4 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RtcbQ99LF4 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RtcbQ99LF4 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC15.3■□□□□ 0.04
RtcbQ99LF4 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RtcbQ99LF4 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RtcbQ99LF4 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RtcbQ99LF4 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RtcbQ99LF4 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RtcbQ99LF4 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RtcbQ99LF4 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RtcbQ99LF4 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RtcbQ99LF4 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RtcbQ99LF4 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC15.29■□□□□ 0.04
RtcbQ99LF4 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RtcbQ99LF4 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.29■□□□□ 0.04
RtcbQ99LF4 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RtcbQ99LF4 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RtcbQ99LF4 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RtcbQ99LF4 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RtcbQ99LF4 Gm25880-201ENSMUST00000104331 132 ntBASIC15.29■□□□□ 0.04
RtcbQ99LF4 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC15.29■□□□□ 0.04
RtcbQ99LF4 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC15.29■□□□□ 0.04
RtcbQ99LF4 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC15.29■□□□□ 0.04
RtcbQ99LF4 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RtcbQ99LF4 Gm37299-201ENSMUST00000193951 826 ntBASIC15.29■□□□□ 0.04
RtcbQ99LF4 Gm9797-202ENSMUST00000218003 294 ntBASIC15.29■□□□□ 0.04
RtcbQ99LF4 Mirlet7i-201ENSMUST00000083472 85 ntBASIC15.29■□□□□ 0.04
RtcbQ99LF4 Gm25517-201ENSMUST00000083865 134 ntBASIC15.29■□□□□ 0.04
RtcbQ99LF4 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.29■□□□□ 0.04
RtcbQ99LF4 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RtcbQ99LF4 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RtcbQ99LF4 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RtcbQ99LF4 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RtcbQ99LF4 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC15.29■□□□□ 0.04
RtcbQ99LF4 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RtcbQ99LF4 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RtcbQ99LF4 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
RtcbQ99LF4 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RtcbQ99LF4 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RtcbQ99LF4 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
RtcbQ99LF4 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RtcbQ99LF4 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.28■□□□□ 0.04
RtcbQ99LF4 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RtcbQ99LF4 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.28■□□□□ 0.04
RtcbQ99LF4 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RtcbQ99LF4 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RtcbQ99LF4 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RtcbQ99LF4 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RtcbQ99LF4 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC15.28■□□□□ 0.04
RtcbQ99LF4 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
RtcbQ99LF4 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RtcbQ99LF4 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RtcbQ99LF4 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RtcbQ99LF4 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RtcbQ99LF4 Gm1848-201ENSMUST00000120711 789 ntBASIC15.28■□□□□ 0.04
RtcbQ99LF4 Gm13263-201ENSMUST00000121271 838 ntBASIC15.28■□□□□ 0.04
RtcbQ99LF4 Gm3671-201ENSMUST00000182463 1007 ntBASIC15.28■□□□□ 0.04
RtcbQ99LF4 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC15.28■□□□□ 0.04
RtcbQ99LF4 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RtcbQ99LF4 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
RtcbQ99LF4 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC15.28■□□□□ 0.04
RtcbQ99LF4 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RtcbQ99LF4 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC15.28■□□□□ 0.04
RtcbQ99LF4 AC134860.1-201ENSMUST00000224867 660 ntBASIC15.28■□□□□ 0.04
RtcbQ99LF4 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RtcbQ99LF4 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RtcbQ99LF4 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RtcbQ99LF4 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RtcbQ99LF4 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
RtcbQ99LF4 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RtcbQ99LF4 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RtcbQ99LF4 Gm44891-201ENSMUST00000208817 2223 ntBASIC15.28■□□□□ 0.04
RtcbQ99LF4 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RtcbQ99LF4 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RtcbQ99LF4 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms