Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Mir6956-201ENSMUST00000183598 62 ntBASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Gm37042-201ENSMUST00000193816 581 ntBASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Thumpd1Q99J36 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Gm13123-201ENSMUST00000122173 492 ntBASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Gm2231-201ENSMUST00000125661 612 ntBASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Gm26185-201ENSMUST00000157692 266 ntBASIC11.07□□□□□ -0.64
Thumpd1Q99J36 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Gm17208-201ENSMUST00000168388 535 ntBASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Thumpd1Q99J36 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Thumpd1Q99J36 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Thumpd1Q99J36 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Thumpd1Q99J36 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Thumpd1Q99J36 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.06□□□□□ -0.64
Thumpd1Q99J36 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.06□□□□□ -0.64
Thumpd1Q99J36 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Thumpd1Q99J36 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Thumpd1Q99J36 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Thumpd1Q99J36 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.06□□□□□ -0.64
Thumpd1Q99J36 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.06□□□□□ -0.64
Thumpd1Q99J36 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Thumpd1Q99J36 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Thumpd1Q99J36 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Thumpd1Q99J36 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Thumpd1Q99J36 Gm12928-201ENSMUST00000117115 573 ntBASIC11.06□□□□□ -0.64
Thumpd1Q99J36 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Thumpd1Q99J36 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Thumpd1Q99J36 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms