Protein–RNA interactions for Protein: Q8VHT7

Gtf3a, Transcription factor IIIA, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3aQ8VHT7 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gtf3aQ8VHT7 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Gtf3aQ8VHT7 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Gtf3aQ8VHT7 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Gtf3aQ8VHT7 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.84□□□□□ -0.67
Gtf3aQ8VHT7 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.84□□□□□ -0.67
Gtf3aQ8VHT7 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Gtf3aQ8VHT7 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Gm23270-201ENSMUST00000104055 131 ntBASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Gm15808-201ENSMUST00000119046 604 ntBASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Gm25668-201ENSMUST00000157700 129 ntBASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 CT573034.1-201ENSMUST00000222983 313 ntBASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Gtf3aQ8VHT7 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 Gm11222-201ENSMUST00000119005 738 ntBASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 Gm12749-201ENSMUST00000122138 1159 ntBASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 Gm31256-201ENSMUST00000194705 506 ntBASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 AC166095.1-201ENSMUST00000223731 1241 ntBASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 Mir433-201ENSMUST00000093564 124 ntBASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 Map1b-203ENSMUST00000223725 2669 ntBASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Gtf3aQ8VHT7 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms