Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Gm18624-201ENSMUST00000220966 658 ntBASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Itm2b-204ENSMUST00000228637 783 ntBASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Pcdh18Q8VHR0 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Gm7488-201ENSMUST00000117148 684 ntBASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Gm15429-201ENSMUST00000151268 798 ntBASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Gm5866-201ENSMUST00000177881 973 ntBASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Pcdh18Q8VHR0 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Gm2423-201ENSMUST00000074863 733 ntBASIC12.03□□□□□ -0.48
Pcdh18Q8VHR0 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms