Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rprd1aQ8VDS4 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Gm25214-201ENSMUST00000104573 129 ntBASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Gm13350-201ENSMUST00000120519 479 ntBASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Gm14999-201ENSMUST00000121039 624 ntBASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Gm14381-201ENSMUST00000122105 414 ntBASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Gm25043-201ENSMUST00000158604 212 ntBASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rprd1aQ8VDS4 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rprd1aQ8VDS4 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.35
Rprd1aQ8VDS4 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rprd1aQ8VDS4 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rprd1aQ8VDS4 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rprd1aQ8VDS4 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rprd1aQ8VDS4 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Rprd1aQ8VDS4 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rprd1aQ8VDS4 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rprd1aQ8VDS4 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rprd1aQ8VDS4 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rprd1aQ8VDS4 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rprd1aQ8VDS4 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rprd1aQ8VDS4 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rprd1aQ8VDS4 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Rprd1aQ8VDS4 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.83□□□□□ -0.36
Rprd1aQ8VDS4 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rprd1aQ8VDS4 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rprd1aQ8VDS4 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rprd1aQ8VDS4 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.83□□□□□ -0.36
Rprd1aQ8VDS4 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Rprd1aQ8VDS4 Gm7118-201ENSMUST00000200167 1003 ntBASIC12.83□□□□□ -0.36
Rprd1aQ8VDS4 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.83□□□□□ -0.36
Rprd1aQ8VDS4 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rprd1aQ8VDS4 Gm10076-201ENSMUST00000073238 384 ntBASIC12.83□□□□□ -0.36
Rprd1aQ8VDS4 Gm26035-201ENSMUST00000083065 308 ntBASIC12.83□□□□□ -0.36
Rprd1aQ8VDS4 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rprd1aQ8VDS4 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rprd1aQ8VDS4 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rprd1aQ8VDS4 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Rprd1aQ8VDS4 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rprd1aQ8VDS4 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rprd1aQ8VDS4 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rprd1aQ8VDS4 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Rprd1aQ8VDS4 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rprd1aQ8VDS4 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.83□□□□□ -0.36
Rprd1aQ8VDS4 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rprd1aQ8VDS4 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rprd1aQ8VDS4 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms