Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpap2Q8VC34 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpap2Q8VC34 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpap2Q8VC34 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rpap2Q8VC34 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rpap2Q8VC34 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpap2Q8VC34 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rpap2Q8VC34 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rpap2Q8VC34 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpap2Q8VC34 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpap2Q8VC34 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rpap2Q8VC34 Gm12241-201ENSMUST00000118330 726 ntBASIC13.64□□□□□ -0.23
Rpap2Q8VC34 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.64□□□□□ -0.23
Rpap2Q8VC34 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.64□□□□□ -0.23
Rpap2Q8VC34 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.64□□□□□ -0.23
Rpap2Q8VC34 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Rpap2Q8VC34 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.64□□□□□ -0.23
Rpap2Q8VC34 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.64□□□□□ -0.23
Rpap2Q8VC34 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rpap2Q8VC34 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.64□□□□□ -0.23
Rpap2Q8VC34 AC132384.14-201ENSMUST00000219346 1147 ntBASIC13.64□□□□□ -0.23
Rpap2Q8VC34 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rpap2Q8VC34 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpap2Q8VC34 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpap2Q8VC34 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rpap2Q8VC34 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpap2Q8VC34 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rpap2Q8VC34 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Rpap2Q8VC34 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpap2Q8VC34 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpap2Q8VC34 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Rpap2Q8VC34 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.64□□□□□ -0.23
Rpap2Q8VC34 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Gm27390-201ENSMUST00000184516 176 ntBASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Gm9368-201ENSMUST00000219348 831 ntBASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Gm9899-201ENSMUST00000065519 555 ntBASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpap2Q8VC34 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Rpap2Q8VC34 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpap2Q8VC34 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpap2Q8VC34 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Rpap2Q8VC34 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpap2Q8VC34 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpap2Q8VC34 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpap2Q8VC34 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpap2Q8VC34 Gm25214-201ENSMUST00000104573 129 ntBASIC13.62□□□□□ -0.23
Rpap2Q8VC34 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.62□□□□□ -0.23
Rpap2Q8VC34 Gm11222-201ENSMUST00000119005 738 ntBASIC13.62□□□□□ -0.23
Rpap2Q8VC34 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Rpap2Q8VC34 Gm5637-201ENSMUST00000153890 1119 ntBASIC13.62□□□□□ -0.23
Rpap2Q8VC34 Gm26956-201ENSMUST00000182176 986 ntBASIC13.62□□□□□ -0.23
Rpap2Q8VC34 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rpap2Q8VC34 Ighv1-60-201ENSMUST00000195816 405 ntBASIC13.62□□□□□ -0.23
Rpap2Q8VC34 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.62□□□□□ -0.23
Rpap2Q8VC34 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.62□□□□□ -0.23
Rpap2Q8VC34 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.62□□□□□ -0.23
Rpap2Q8VC34 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpap2Q8VC34 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.62□□□□□ -0.23
Rpap2Q8VC34 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.62□□□□□ -0.23
Rpap2Q8VC34 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms