Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Vps39Q8R5L3 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vps39Q8R5L3 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vps39Q8R5L3 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vps39Q8R5L3 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vps39Q8R5L3 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vps39Q8R5L3 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vps39Q8R5L3 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Vps39Q8R5L3 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vps39Q8R5L3 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Vps39Q8R5L3 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vps39Q8R5L3 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Vps39Q8R5L3 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Vps39Q8R5L3 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps39Q8R5L3 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps39Q8R5L3 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vps39Q8R5L3 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps39Q8R5L3 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps39Q8R5L3 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps39Q8R5L3 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps39Q8R5L3 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vps39Q8R5L3 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps39Q8R5L3 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps39Q8R5L3 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.45□□□□□ -0.42
Vps39Q8R5L3 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps39Q8R5L3 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vps39Q8R5L3 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps39Q8R5L3 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vps39Q8R5L3 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vps39Q8R5L3 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Vps39Q8R5L3 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vps39Q8R5L3 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vps39Q8R5L3 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.45□□□□□ -0.42
Vps39Q8R5L3 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.45□□□□□ -0.42
Vps39Q8R5L3 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Vps39Q8R5L3 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.45□□□□□ -0.42
Vps39Q8R5L3 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.45□□□□□ -0.42
Vps39Q8R5L3 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Vps39Q8R5L3 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps39Q8R5L3 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps39Q8R5L3 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps39Q8R5L3 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps39Q8R5L3 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps39Q8R5L3 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Vps39Q8R5L3 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps39Q8R5L3 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps39Q8R5L3 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps39Q8R5L3 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps39Q8R5L3 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.45□□□□□ -0.42
Vps39Q8R5L3 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Vps39Q8R5L3 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.44□□□□□ -0.42
Vps39Q8R5L3 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps39Q8R5L3 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.44□□□□□ -0.42
Vps39Q8R5L3 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps39Q8R5L3 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vps39Q8R5L3 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vps39Q8R5L3 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Vps39Q8R5L3 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps39Q8R5L3 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps39Q8R5L3 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps39Q8R5L3 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps39Q8R5L3 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps39Q8R5L3 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Vps39Q8R5L3 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.44□□□□□ -0.42
Vps39Q8R5L3 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vps39Q8R5L3 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vps39Q8R5L3 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps39Q8R5L3 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.44□□□□□ -0.42
Vps39Q8R5L3 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.44□□□□□ -0.42
Vps39Q8R5L3 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.44□□□□□ -0.42
Vps39Q8R5L3 Gm11964-201ENSMUST00000120982 444 ntBASIC12.44□□□□□ -0.42
Vps39Q8R5L3 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Vps39Q8R5L3 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.44□□□□□ -0.42
Vps39Q8R5L3 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps39Q8R5L3 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Vps39Q8R5L3 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.44□□□□□ -0.42
Vps39Q8R5L3 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.44□□□□□ -0.42
Vps39Q8R5L3 Gm18584-201ENSMUST00000203098 964 ntBASIC12.44□□□□□ -0.42
Vps39Q8R5L3 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps39Q8R5L3 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps39Q8R5L3 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vps39Q8R5L3 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps39Q8R5L3 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps39Q8R5L3 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vps39Q8R5L3 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps39Q8R5L3 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps39Q8R5L3 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Vps39Q8R5L3 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Vps39Q8R5L3 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Vps39Q8R5L3 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms