Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Ubqln1Q8R317 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln1Q8R317 Gm37424-201ENSMUST00000191727 561 ntBASIC11.83□□□□□ -0.52
Ubqln1Q8R317 Gm42693-201ENSMUST00000196779 631 ntBASIC11.83□□□□□ -0.52
Ubqln1Q8R317 Gm45925-201ENSMUST00000218882 744 ntBASIC11.83□□□□□ -0.52
Ubqln1Q8R317 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.83□□□□□ -0.52
Ubqln1Q8R317 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.83□□□□□ -0.52
Ubqln1Q8R317 Rassf8-202ENSMUST00000058538 1131 ntBASIC11.83□□□□□ -0.52
Ubqln1Q8R317 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln1Q8R317 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ubqln1Q8R317 Gm10478-201ENSMUST00000084451 396 ntBASIC11.83□□□□□ -0.52
Ubqln1Q8R317 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln1Q8R317 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln1Q8R317 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln1Q8R317 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Ubqln1Q8R317 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln1Q8R317 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Ubqln1Q8R317 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln1Q8R317 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln1Q8R317 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln1Q8R317 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln1Q8R317 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln1Q8R317 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.83□□□□□ -0.52
Ubqln1Q8R317 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln1Q8R317 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln1Q8R317 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln1Q8R317 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.83□□□□□ -0.52
Ubqln1Q8R317 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ubqln1Q8R317 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Gm24231-201ENSMUST00000104315 133 ntBASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Mir1247-201ENSMUST00000116706 82 ntBASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Gm8018-201ENSMUST00000173536 789 ntBASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Gm22058-201ENSMUST00000083393 310 ntBASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ubqln1Q8R317 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.81□□□□□ -0.52
Ubqln1Q8R317 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln1Q8R317 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln1Q8R317 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln1Q8R317 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.81□□□□□ -0.52
Ubqln1Q8R317 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln1Q8R317 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Ubqln1Q8R317 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln1Q8R317 Gm23931-201ENSMUST00000103842 109 ntBASIC11.81□□□□□ -0.52
Ubqln1Q8R317 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.81□□□□□ -0.52
Ubqln1Q8R317 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.81□□□□□ -0.52
Ubqln1Q8R317 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln1Q8R317 Gm14760-201ENSMUST00000121831 999 ntBASIC11.81□□□□□ -0.52
Ubqln1Q8R317 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln1Q8R317 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln1Q8R317 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
Ubqln1Q8R317 Gm19184-201ENSMUST00000196798 928 ntBASIC11.81□□□□□ -0.52
Ubqln1Q8R317 Gm44405-201ENSMUST00000198952 126 ntBASIC11.81□□□□□ -0.52
Ubqln1Q8R317 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln1Q8R317 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ubqln1Q8R317 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms