Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nudcd3Q8R1N4 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Gm15703-201ENSMUST00000120250 880 ntBASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Mir6392-201ENSMUST00000184924 108 ntBASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Gm5867-201ENSMUST00000063197 592 ntBASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nudcd3Q8R1N4 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nudcd3Q8R1N4 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nudcd3Q8R1N4 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nudcd3Q8R1N4 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nudcd3Q8R1N4 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nudcd3Q8R1N4 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Nudcd3Q8R1N4 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nudcd3Q8R1N4 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nudcd3Q8R1N4 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Nudcd3Q8R1N4 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nudcd3Q8R1N4 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nudcd3Q8R1N4 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Nudcd3Q8R1N4 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Nudcd3Q8R1N4 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms