Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.32□□□□□ -0.6
Ebf4Q8K4J2 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 Gm6888-201ENSMUST00000221983 706 ntBASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf4Q8K4J2 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Gm16202-201ENSMUST00000117532 544 ntBASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Gm14767-201ENSMUST00000121559 586 ntBASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Gm5279-201ENSMUST00000199575 745 ntBASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Gm44069-201ENSMUST00000204898 506 ntBASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf4Q8K4J2 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.29□□□□□ -0.6
Ebf4Q8K4J2 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms