Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 Gm11964-201ENSMUST00000120982 444 ntBASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 Gm13786-201ENSMUST00000122371 333 ntBASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 Gm9823-201ENSMUST00000051212 327 ntBASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rfwd3Q8CIK8 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 Mospd4-201ENSMUST00000180618 576 ntBASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.72□□□□□ -0.53
Rfwd3Q8CIK8 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rfwd3Q8CIK8 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rfwd3Q8CIK8 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rfwd3Q8CIK8 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rfwd3Q8CIK8 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.71□□□□□ -0.53
Rfwd3Q8CIK8 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rfwd3Q8CIK8 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rfwd3Q8CIK8 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rfwd3Q8CIK8 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rfwd3Q8CIK8 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.71□□□□□ -0.53
Rfwd3Q8CIK8 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.71□□□□□ -0.53
Rfwd3Q8CIK8 Gm5940-201ENSMUST00000117582 1068 ntBASIC11.71□□□□□ -0.53
Rfwd3Q8CIK8 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rfwd3Q8CIK8 Gm13316-201ENSMUST00000140537 691 ntBASIC11.71□□□□□ -0.53
Rfwd3Q8CIK8 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.71□□□□□ -0.53
Rfwd3Q8CIK8 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rfwd3Q8CIK8 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.71□□□□□ -0.53
Rfwd3Q8CIK8 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.71□□□□□ -0.53
Rfwd3Q8CIK8 Gm8018-201ENSMUST00000173536 789 ntBASIC11.71□□□□□ -0.53
Rfwd3Q8CIK8 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.71□□□□□ -0.53
Rfwd3Q8CIK8 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 1163.2 ms