Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Uba3Q8C878 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Uba3Q8C878 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Uba3Q8C878 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Uba3Q8C878 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Uba3Q8C878 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.1□□□□□ -0.31
Uba3Q8C878 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Uba3Q8C878 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Uba3Q8C878 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Uba3Q8C878 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.1□□□□□ -0.31
Uba3Q8C878 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Uba3Q8C878 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.1□□□□□ -0.31
Uba3Q8C878 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Uba3Q8C878 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.1□□□□□ -0.31
Uba3Q8C878 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.1□□□□□ -0.31
Uba3Q8C878 Gm26956-201ENSMUST00000182176 986 ntBASIC13.1□□□□□ -0.31
Uba3Q8C878 Gm43822-201ENSMUST00000200285 476 ntBASIC13.1□□□□□ -0.31
Uba3Q8C878 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Uba3Q8C878 Gm30285-201ENSMUST00000214614 422 ntBASIC13.1□□□□□ -0.31
Uba3Q8C878 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Uba3Q8C878 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Uba3Q8C878 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Uba3Q8C878 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.1□□□□□ -0.31
Uba3Q8C878 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.1□□□□□ -0.31
Uba3Q8C878 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Uba3Q8C878 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Uba3Q8C878 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.1□□□□□ -0.31
Uba3Q8C878 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Uba3Q8C878 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Uba3Q8C878 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.1□□□□□ -0.31
Uba3Q8C878 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Uba3Q8C878 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Uba3Q8C878 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Uba3Q8C878 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Uba3Q8C878 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Uba3Q8C878 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Uba3Q8C878 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Uba3Q8C878 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Uba3Q8C878 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Uba3Q8C878 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Uba3Q8C878 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.09□□□□□ -0.31
Uba3Q8C878 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
Uba3Q8C878 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Uba3Q8C878 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Uba3Q8C878 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Uba3Q8C878 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Uba3Q8C878 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Uba3Q8C878 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Uba3Q8C878 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Uba3Q8C878 Gm42937-201ENSMUST00000197360 752 ntBASIC13.09□□□□□ -0.31
Uba3Q8C878 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Uba3Q8C878 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Uba3Q8C878 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Uba3Q8C878 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Uba3Q8C878 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Uba3Q8C878 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Uba3Q8C878 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Uba3Q8C878 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Uba3Q8C878 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Uba3Q8C878 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Uba3Q8C878 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Uba3Q8C878 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Uba3Q8C878 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.08□□□□□ -0.32
Uba3Q8C878 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Uba3Q8C878 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Uba3Q8C878 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Uba3Q8C878 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Uba3Q8C878 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Uba3Q8C878 Gm9083-201ENSMUST00000120423 819 ntBASIC13.08□□□□□ -0.32
Uba3Q8C878 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.08□□□□□ -0.32
Uba3Q8C878 Gm38341-201ENSMUST00000195357 515 ntBASIC13.08□□□□□ -0.32
Uba3Q8C878 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.08□□□□□ -0.32
Uba3Q8C878 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Uba3Q8C878 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Uba3Q8C878 Gm43758-201ENSMUST00000199500 367 ntBASIC13.08□□□□□ -0.32
Uba3Q8C878 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.08□□□□□ -0.32
Uba3Q8C878 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Uba3Q8C878 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.08□□□□□ -0.32
Uba3Q8C878 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Uba3Q8C878 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Uba3Q8C878 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Uba3Q8C878 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Uba3Q8C878 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.08□□□□□ -0.32
Uba3Q8C878 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Uba3Q8C878 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Uba3Q8C878 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Uba3Q8C878 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Uba3Q8C878 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Uba3Q8C878 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Uba3Q8C878 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Uba3Q8C878 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Uba3Q8C878 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Uba3Q8C878 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Uba3Q8C878 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Uba3Q8C878 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Uba3Q8C878 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Uba3Q8C878 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Uba3Q8C878 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Uba3Q8C878 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.07□□□□□ -0.32
Uba3Q8C878 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms