Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ccdc60Q8C4J0 Gm8038-201ENSMUST00000164674 2044 ntBASIC15.85■□□□□ 0.13
Ccdc60Q8C4J0 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc60Q8C4J0 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc60Q8C4J0 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Ccdc60Q8C4J0 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc60Q8C4J0 Gm43463-201ENSMUST00000195967 1803 ntBASIC15.85■□□□□ 0.13
Ccdc60Q8C4J0 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc60Q8C4J0 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc60Q8C4J0 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc60Q8C4J0 Gm14832-201ENSMUST00000121289 322 ntBASIC15.85■□□□□ 0.13
Ccdc60Q8C4J0 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc60Q8C4J0 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc60Q8C4J0 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc60Q8C4J0 Gm38341-201ENSMUST00000195357 515 ntBASIC15.85■□□□□ 0.13
Ccdc60Q8C4J0 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc60Q8C4J0 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc60Q8C4J0 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc60Q8C4J0 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc60Q8C4J0 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc60Q8C4J0 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc60Q8C4J0 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc60Q8C4J0 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc60Q8C4J0 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
Ccdc60Q8C4J0 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc60Q8C4J0 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc60Q8C4J0 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Ccdc60Q8C4J0 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ccdc60Q8C4J0 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Ccdc60Q8C4J0 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc60Q8C4J0 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
Ccdc60Q8C4J0 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc60Q8C4J0 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc60Q8C4J0 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Ccdc60Q8C4J0 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc60Q8C4J0 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc60Q8C4J0 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc60Q8C4J0 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc60Q8C4J0 Gm23270-201ENSMUST00000104055 131 ntBASIC15.84■□□□□ 0.13
Ccdc60Q8C4J0 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Ccdc60Q8C4J0 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Ccdc60Q8C4J0 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc60Q8C4J0 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC15.84■□□□□ 0.13
Ccdc60Q8C4J0 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc60Q8C4J0 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Ccdc60Q8C4J0 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc60Q8C4J0 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
Ccdc60Q8C4J0 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc60Q8C4J0 Gm44958-201ENSMUST00000203734 736 ntBASIC15.84■□□□□ 0.13
Ccdc60Q8C4J0 Gm44124-201ENSMUST00000204159 472 ntBASIC15.84■□□□□ 0.13
Ccdc60Q8C4J0 Gm3961-201ENSMUST00000204425 994 ntBASIC15.84■□□□□ 0.13
Ccdc60Q8C4J0 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc60Q8C4J0 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc60Q8C4J0 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Ccdc60Q8C4J0 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Ccdc60Q8C4J0 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc60Q8C4J0 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc60Q8C4J0 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc60Q8C4J0 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Ccdc60Q8C4J0 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc60Q8C4J0 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc60Q8C4J0 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC15.84■□□□□ 0.13
Ccdc60Q8C4J0 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc60Q8C4J0 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc60Q8C4J0 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc60Q8C4J0 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ccdc60Q8C4J0 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ccdc60Q8C4J0 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Ccdc60Q8C4J0 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ccdc60Q8C4J0 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ccdc60Q8C4J0 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ccdc60Q8C4J0 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Ccdc60Q8C4J0 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Ccdc60Q8C4J0 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc60Q8C4J0 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc60Q8C4J0 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc60Q8C4J0 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc60Q8C4J0 Gm2606-201ENSMUST00000100754 1002 ntBASIC15.83■□□□□ 0.12
Ccdc60Q8C4J0 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC15.83■□□□□ 0.12
Ccdc60Q8C4J0 Gm12286-201ENSMUST00000119246 1002 ntBASIC15.83■□□□□ 0.12
Ccdc60Q8C4J0 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Ccdc60Q8C4J0 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc60Q8C4J0 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc60Q8C4J0 AC122371.3-201ENSMUST00000223402 1061 ntBASIC15.83■□□□□ 0.12
Ccdc60Q8C4J0 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc60Q8C4J0 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc60Q8C4J0 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc60Q8C4J0 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc60Q8C4J0 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ccdc60Q8C4J0 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms