Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ptcd1Q8C2E4 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ptcd1Q8C2E4 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC15.35■□□□□ 0.05
Ptcd1Q8C2E4 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC15.35■□□□□ 0.05
Ptcd1Q8C2E4 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptcd1Q8C2E4 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptcd1Q8C2E4 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptcd1Q8C2E4 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptcd1Q8C2E4 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Ptcd1Q8C2E4 AC159308.2-201ENSMUST00000213592 2325 ntBASIC15.35■□□□□ 0.05
Ptcd1Q8C2E4 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Ptcd1Q8C2E4 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ptcd1Q8C2E4 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptcd1Q8C2E4 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptcd1Q8C2E4 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Ptcd1Q8C2E4 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptcd1Q8C2E4 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptcd1Q8C2E4 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptcd1Q8C2E4 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ptcd1Q8C2E4 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ptcd1Q8C2E4 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Ptcd1Q8C2E4 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ptcd1Q8C2E4 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ptcd1Q8C2E4 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Ptcd1Q8C2E4 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ptcd1Q8C2E4 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ptcd1Q8C2E4 Gm14644-201ENSMUST00000116671 647 ntBASIC15.34■□□□□ 0.05
Ptcd1Q8C2E4 Gm14460-201ENSMUST00000121511 639 ntBASIC15.34■□□□□ 0.05
Ptcd1Q8C2E4 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC15.34■□□□□ 0.05
Ptcd1Q8C2E4 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC15.34■□□□□ 0.05
Ptcd1Q8C2E4 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ptcd1Q8C2E4 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC15.34■□□□□ 0.05
Ptcd1Q8C2E4 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ptcd1Q8C2E4 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC15.34■□□□□ 0.05
Ptcd1Q8C2E4 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Ptcd1Q8C2E4 Gm21027-201ENSMUST00000219300 1236 ntBASIC15.34■□□□□ 0.05
Ptcd1Q8C2E4 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC15.34■□□□□ 0.05
Ptcd1Q8C2E4 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ptcd1Q8C2E4 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ptcd1Q8C2E4 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ptcd1Q8C2E4 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ptcd1Q8C2E4 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ptcd1Q8C2E4 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ptcd1Q8C2E4 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ptcd1Q8C2E4 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ptcd1Q8C2E4 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Ptcd1Q8C2E4 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ptcd1Q8C2E4 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ptcd1Q8C2E4 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC15.34■□□□□ 0.05
Ptcd1Q8C2E4 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ptcd1Q8C2E4 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ptcd1Q8C2E4 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC15.34■□□□□ 0.05
Ptcd1Q8C2E4 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Ptcd1Q8C2E4 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ptcd1Q8C2E4 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ptcd1Q8C2E4 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Ptcd1Q8C2E4 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ptcd1Q8C2E4 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ptcd1Q8C2E4 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ptcd1Q8C2E4 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ptcd1Q8C2E4 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ptcd1Q8C2E4 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ptcd1Q8C2E4 Gm13035-201ENSMUST00000117496 342 ntBASIC15.33■□□□□ 0.04
Ptcd1Q8C2E4 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ptcd1Q8C2E4 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ptcd1Q8C2E4 Gm17391-201ENSMUST00000171036 126 ntBASIC15.33■□□□□ 0.04
Ptcd1Q8C2E4 Gm43916-201ENSMUST00000205062 967 ntBASIC15.33■□□□□ 0.04
Ptcd1Q8C2E4 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ptcd1Q8C2E4 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ptcd1Q8C2E4 Mir339-201ENSMUST00000083659 96 ntBASIC15.33■□□□□ 0.04
Ptcd1Q8C2E4 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ptcd1Q8C2E4 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ptcd1Q8C2E4 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ptcd1Q8C2E4 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ptcd1Q8C2E4 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ptcd1Q8C2E4 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC15.33■□□□□ 0.04
Ptcd1Q8C2E4 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ptcd1Q8C2E4 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ptcd1Q8C2E4 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ptcd1Q8C2E4 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ptcd1Q8C2E4 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ptcd1Q8C2E4 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ptcd1Q8C2E4 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ptcd1Q8C2E4 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ptcd1Q8C2E4 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ptcd1Q8C2E4 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ptcd1Q8C2E4 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ptcd1Q8C2E4 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptcd1Q8C2E4 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptcd1Q8C2E4 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptcd1Q8C2E4 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
Ptcd1Q8C2E4 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptcd1Q8C2E4 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptcd1Q8C2E4 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptcd1Q8C2E4 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptcd1Q8C2E4 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Ptcd1Q8C2E4 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptcd1Q8C2E4 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ptcd1Q8C2E4 Gm6506-201ENSMUST00000119775 1136 ntBASIC15.32■□□□□ 0.04
Ptcd1Q8C2E4 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms