Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.74□□□□□ -0.53
Ska3Q8C263 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ska3Q8C263 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Ska3Q8C263 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ska3Q8C263 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ska3Q8C263 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ska3Q8C263 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ska3Q8C263 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ska3Q8C263 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ska3Q8C263 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ska3Q8C263 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ska3Q8C263 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ska3Q8C263 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ska3Q8C263 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ska3Q8C263 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ska3Q8C263 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ska3Q8C263 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.73□□□□□ -0.53
Ska3Q8C263 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ska3Q8C263 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ska3Q8C263 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ska3Q8C263 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ska3Q8C263 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ska3Q8C263 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.73□□□□□ -0.53
Ska3Q8C263 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ska3Q8C263 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.73□□□□□ -0.53
Ska3Q8C263 Mir1938-201ENSMUST00000158746 100 ntBASIC11.73□□□□□ -0.53
Ska3Q8C263 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Ska3Q8C263 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
Ska3Q8C263 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Ska3Q8C263 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ska3Q8C263 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ska3Q8C263 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ska3Q8C263 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ska3Q8C263 Gm37489-201ENSMUST00000191883 159 ntBASIC11.73□□□□□ -0.53
Ska3Q8C263 Olfr284-202ENSMUST00000206647 966 ntBASIC11.73□□□□□ -0.53
Ska3Q8C263 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ska3Q8C263 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ska3Q8C263 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.73□□□□□ -0.53
Ska3Q8C263 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ska3Q8C263 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ska3Q8C263 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ska3Q8C263 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ska3Q8C263 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ska3Q8C263 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ska3Q8C263 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ska3Q8C263 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ska3Q8C263 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ska3Q8C263 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Ska3Q8C263 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ska3Q8C263 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ska3Q8C263 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ska3Q8C263 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.72□□□□□ -0.53
Ska3Q8C263 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ska3Q8C263 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ska3Q8C263 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ska3Q8C263 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ska3Q8C263 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ska3Q8C263 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.72□□□□□ -0.53
Ska3Q8C263 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.72□□□□□ -0.53
Ska3Q8C263 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.72□□□□□ -0.53
Ska3Q8C263 Gm12058-201ENSMUST00000118614 437 ntBASIC11.72□□□□□ -0.53
Ska3Q8C263 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.72□□□□□ -0.53
Ska3Q8C263 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.72□□□□□ -0.53
Ska3Q8C263 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ska3Q8C263 Gm18935-201ENSMUST00000212692 664 ntBASIC11.72□□□□□ -0.53
Ska3Q8C263 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.72□□□□□ -0.53
Ska3Q8C263 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Ska3Q8C263 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ska3Q8C263 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ska3Q8C263 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ska3Q8C263 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ska3Q8C263 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ska3Q8C263 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ska3Q8C263 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ska3Q8C263 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ska3Q8C263 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ska3Q8C263 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ska3Q8C263 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ska3Q8C263 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ska3Q8C263 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Ska3Q8C263 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ska3Q8C263 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ska3Q8C263 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Ska3Q8C263 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ska3Q8C263 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ska3Q8C263 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ska3Q8C263 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ska3Q8C263 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ska3Q8C263 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.71□□□□□ -0.53
Ska3Q8C263 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ska3Q8C263 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ska3Q8C263 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ska3Q8C263 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ska3Q8C263 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ska3Q8C263 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Ska3Q8C263 Gm24231-201ENSMUST00000104315 133 ntBASIC11.71□□□□□ -0.53
Ska3Q8C263 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.71□□□□□ -0.53
Ska3Q8C263 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Ska3Q8C263 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Ska3Q8C263 Gm4986-201ENSMUST00000119731 549 ntBASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms