Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Mir6979-201ENSMUST00000183927 56 ntBASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Nsd1-205ENSMUST00000224693 852 ntBASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Sh3rf2Q8BZT2 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Gm23119-201ENSMUST00000158610 140 ntBASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Gm25732-201ENSMUST00000175168 60 ntBASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh3rf2Q8BZT2 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sh3rf2Q8BZT2 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms