Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp47Q8BY87 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp47Q8BY87 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Usp47Q8BY87 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp47Q8BY87 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Usp47Q8BY87 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp47Q8BY87 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC17.48■□□□□ 0.39
Usp47Q8BY87 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp47Q8BY87 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Usp47Q8BY87 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp47Q8BY87 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Usp47Q8BY87 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Usp47Q8BY87 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC17.47■□□□□ 0.39
Usp47Q8BY87 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC17.47■□□□□ 0.39
Usp47Q8BY87 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp47Q8BY87 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp47Q8BY87 Gm10305-201ENSMUST00000195331 2475 ntBASIC17.47■□□□□ 0.39
Usp47Q8BY87 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC17.47■□□□□ 0.39
Usp47Q8BY87 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Usp47Q8BY87 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp47Q8BY87 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp47Q8BY87 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp47Q8BY87 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp47Q8BY87 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Usp47Q8BY87 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Usp47Q8BY87 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Usp47Q8BY87 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp47Q8BY87 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
Usp47Q8BY87 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC17.47■□□□□ 0.39
Usp47Q8BY87 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp47Q8BY87 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC17.47■□□□□ 0.39
Usp47Q8BY87 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC17.47■□□□□ 0.39
Usp47Q8BY87 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Usp47Q8BY87 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Usp47Q8BY87 Gm3786-201ENSMUST00000202659 378 ntBASIC17.47■□□□□ 0.39
Usp47Q8BY87 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC17.47■□□□□ 0.39
Usp47Q8BY87 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Usp47Q8BY87 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Usp47Q8BY87 Gm9947-201ENSMUST00000067599 2920 ntBASIC17.47■□□□□ 0.39
Usp47Q8BY87 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Usp47Q8BY87 Gm20633-201ENSMUST00000176742 2831 ntBASIC17.47■□□□□ 0.39
Usp47Q8BY87 Gm43677-201ENSMUST00000198098 2378 ntBASIC17.47■□□□□ 0.39
Usp47Q8BY87 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC17.46■□□□□ 0.39
Usp47Q8BY87 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp47Q8BY87 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp47Q8BY87 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC17.46■□□□□ 0.39
Usp47Q8BY87 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp47Q8BY87 Gm18782-201ENSMUST00000209023 1399 ntBASIC17.46■□□□□ 0.39
Usp47Q8BY87 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp47Q8BY87 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Usp47Q8BY87 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp47Q8BY87 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Usp47Q8BY87 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
Usp47Q8BY87 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Usp47Q8BY87 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp47Q8BY87 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Usp47Q8BY87 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Usp47Q8BY87 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC17.46■□□□□ 0.39
Usp47Q8BY87 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Usp47Q8BY87 AC155637.1-201ENSMUST00000218560 636 ntBASIC17.46■□□□□ 0.39
Usp47Q8BY87 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp47Q8BY87 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC17.46■□□□□ 0.39
Usp47Q8BY87 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
Usp47Q8BY87 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Usp47Q8BY87 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp47Q8BY87 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp47Q8BY87 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Usp47Q8BY87 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp47Q8BY87 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp47Q8BY87 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp47Q8BY87 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp47Q8BY87 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Usp47Q8BY87 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp47Q8BY87 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp47Q8BY87 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Usp47Q8BY87 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Usp47Q8BY87 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Usp47Q8BY87 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Usp47Q8BY87 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
Usp47Q8BY87 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Usp47Q8BY87 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp47Q8BY87 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Usp47Q8BY87 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Usp47Q8BY87 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp47Q8BY87 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC17.45■□□□□ 0.38
Usp47Q8BY87 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp47Q8BY87 Mir6927-201ENSMUST00000184494 71 ntBASIC17.45■□□□□ 0.38
Usp47Q8BY87 Gm18753-201ENSMUST00000201000 566 ntBASIC17.45■□□□□ 0.38
Usp47Q8BY87 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC17.45■□□□□ 0.38
Usp47Q8BY87 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp47Q8BY87 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp47Q8BY87 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp47Q8BY87 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Usp47Q8BY87 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp47Q8BY87 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp47Q8BY87 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Usp47Q8BY87 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC17.45■□□□□ 0.38
Usp47Q8BY87 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Usp47Q8BY87 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Usp47Q8BY87 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms