Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nup54Q8BTS4 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Nup54Q8BTS4 Gm24934-201ENSMUST00000103764 111 ntBASIC12.73□□□□□ -0.37
Nup54Q8BTS4 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Nup54Q8BTS4 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nup54Q8BTS4 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.73□□□□□ -0.37
Nup54Q8BTS4 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Nup54Q8BTS4 Gm26083-201ENSMUST00000157904 193 ntBASIC12.73□□□□□ -0.37
Nup54Q8BTS4 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nup54Q8BTS4 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.73□□□□□ -0.37
Nup54Q8BTS4 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.73□□□□□ -0.37
Nup54Q8BTS4 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.73□□□□□ -0.37
Nup54Q8BTS4 Gm38317-201ENSMUST00000195564 343 ntBASIC12.73□□□□□ -0.37
Nup54Q8BTS4 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nup54Q8BTS4 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.73□□□□□ -0.37
Nup54Q8BTS4 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.73□□□□□ -0.37
Nup54Q8BTS4 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.73□□□□□ -0.37
Nup54Q8BTS4 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.73□□□□□ -0.37
Nup54Q8BTS4 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nup54Q8BTS4 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nup54Q8BTS4 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nup54Q8BTS4 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nup54Q8BTS4 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.73□□□□□ -0.37
Nup54Q8BTS4 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.73□□□□□ -0.37
Nup54Q8BTS4 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.73□□□□□ -0.37
Nup54Q8BTS4 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Nup54Q8BTS4 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nup54Q8BTS4 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Nup54Q8BTS4 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.73□□□□□ -0.37
Nup54Q8BTS4 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Nup54Q8BTS4 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.73□□□□□ -0.37
Nup54Q8BTS4 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.73□□□□□ -0.37
Nup54Q8BTS4 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup54Q8BTS4 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nup54Q8BTS4 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Nup54Q8BTS4 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup54Q8BTS4 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup54Q8BTS4 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup54Q8BTS4 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.72□□□□□ -0.37
Nup54Q8BTS4 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup54Q8BTS4 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nup54Q8BTS4 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup54Q8BTS4 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup54Q8BTS4 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.72□□□□□ -0.37
Nup54Q8BTS4 Gm12015-201ENSMUST00000117065 843 ntBASIC12.72□□□□□ -0.37
Nup54Q8BTS4 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Nup54Q8BTS4 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup54Q8BTS4 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.72□□□□□ -0.37
Nup54Q8BTS4 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup54Q8BTS4 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nup54Q8BTS4 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Nup54Q8BTS4 AA914427-201ENSMUST00000193194 1166 ntBASIC12.72□□□□□ -0.37
Nup54Q8BTS4 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Nup54Q8BTS4 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.72□□□□□ -0.37
Nup54Q8BTS4 Gm9257-201ENSMUST00000221254 232 ntBASIC12.72□□□□□ -0.37
Nup54Q8BTS4 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.72□□□□□ -0.37
Nup54Q8BTS4 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup54Q8BTS4 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Nup54Q8BTS4 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup54Q8BTS4 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup54Q8BTS4 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup54Q8BTS4 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nup54Q8BTS4 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup54Q8BTS4 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup54Q8BTS4 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Nup54Q8BTS4 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.72□□□□□ -0.37
Nup54Q8BTS4 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.72□□□□□ -0.37
Nup54Q8BTS4 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.72□□□□□ -0.37
Nup54Q8BTS4 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup54Q8BTS4 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Nup54Q8BTS4 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nup54Q8BTS4 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Nup54Q8BTS4 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nup54Q8BTS4 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nup54Q8BTS4 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.71□□□□□ -0.37
Nup54Q8BTS4 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nup54Q8BTS4 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Nup54Q8BTS4 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nup54Q8BTS4 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.71□□□□□ -0.37
Nup54Q8BTS4 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nup54Q8BTS4 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nup54Q8BTS4 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nup54Q8BTS4 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nup54Q8BTS4 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nup54Q8BTS4 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Nup54Q8BTS4 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nup54Q8BTS4 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.71□□□□□ -0.37
Nup54Q8BTS4 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Nup54Q8BTS4 Gm24830-201ENSMUST00000102024 166 ntBASIC12.71□□□□□ -0.37
Nup54Q8BTS4 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC12.71□□□□□ -0.37
Nup54Q8BTS4 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.71□□□□□ -0.37
Nup54Q8BTS4 Gm15276-201ENSMUST00000145953 498 ntBASIC12.71□□□□□ -0.37
Nup54Q8BTS4 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.71□□□□□ -0.37
Nup54Q8BTS4 Gm25890-201ENSMUST00000177643 165 ntBASIC12.71□□□□□ -0.37
Nup54Q8BTS4 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.71□□□□□ -0.37
Nup54Q8BTS4 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.71□□□□□ -0.37
Nup54Q8BTS4 Gm22614-201ENSMUST00000178300 165 ntBASIC12.71□□□□□ -0.37
Nup54Q8BTS4 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Nup54Q8BTS4 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC12.71□□□□□ -0.37
Nup54Q8BTS4 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms