Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4Q8BQZ5 Gm45331-201ENSMUST00000209868 554 ntBASIC12.08□□□□□ -0.48
Cpsf4Q8BQZ5 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4Q8BQZ5 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.08□□□□□ -0.48
Cpsf4Q8BQZ5 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.08□□□□□ -0.48
Cpsf4Q8BQZ5 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cpsf4Q8BQZ5 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cpsf4Q8BQZ5 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4Q8BQZ5 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4Q8BQZ5 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Cpsf4Q8BQZ5 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.08□□□□□ -0.48
Cpsf4Q8BQZ5 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cpsf4Q8BQZ5 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4Q8BQZ5 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4Q8BQZ5 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4Q8BQZ5 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4Q8BQZ5 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4Q8BQZ5 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cpsf4Q8BQZ5 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.08□□□□□ -0.48
Cpsf4Q8BQZ5 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Gm14704-201ENSMUST00000120300 874 ntBASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Gm22121-201ENSMUST00000175148 54 ntBASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Gm43133-201ENSMUST00000197472 463 ntBASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Gm7399-201ENSMUST00000032395 858 ntBASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Cpsf4Q8BQZ5 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Gm3890-201ENSMUST00000182416 207 ntBASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Gm38158-201ENSMUST00000194617 339 ntBASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Gm45930-201ENSMUST00000221330 292 ntBASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.06□□□□□ -0.48
Cpsf4Q8BQZ5 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms