Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp54Q8BL06 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp54Q8BL06 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Usp54Q8BL06 AC123834.1-201ENSMUST00000225346 2043 ntBASIC17.37■□□□□ 0.37
Usp54Q8BL06 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Usp54Q8BL06 Gm23272-201ENSMUST00000104053 129 ntBASIC17.36■□□□□ 0.37
Usp54Q8BL06 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC17.36■□□□□ 0.37
Usp54Q8BL06 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp54Q8BL06 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC17.36■□□□□ 0.37
Usp54Q8BL06 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp54Q8BL06 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp54Q8BL06 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp54Q8BL06 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp54Q8BL06 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC17.36■□□□□ 0.37
Usp54Q8BL06 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC17.36■□□□□ 0.37
Usp54Q8BL06 Gm5451-201ENSMUST00000080545 579 ntBASIC17.36■□□□□ 0.37
Usp54Q8BL06 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp54Q8BL06 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp54Q8BL06 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Usp54Q8BL06 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp54Q8BL06 Gm38346-201ENSMUST00000192379 2639 ntBASIC17.36■□□□□ 0.37
Usp54Q8BL06 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp54Q8BL06 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp54Q8BL06 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp54Q8BL06 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp54Q8BL06 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Usp54Q8BL06 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp54Q8BL06 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Usp54Q8BL06 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp54Q8BL06 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Usp54Q8BL06 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Usp54Q8BL06 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
Usp54Q8BL06 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp54Q8BL06 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp54Q8BL06 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Usp54Q8BL06 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC17.36■□□□□ 0.37
Usp54Q8BL06 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp54Q8BL06 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC17.36■□□□□ 0.37
Usp54Q8BL06 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Usp54Q8BL06 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Usp54Q8BL06 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp54Q8BL06 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp54Q8BL06 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC17.35■□□□□ 0.37
Usp54Q8BL06 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Usp54Q8BL06 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Usp54Q8BL06 Gm8155-201ENSMUST00000216363 1612 ntBASIC17.35■□□□□ 0.37
Usp54Q8BL06 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp54Q8BL06 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp54Q8BL06 Gm37348-201ENSMUST00000193104 1789 ntBASIC17.35■□□□□ 0.37
Usp54Q8BL06 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC17.35■□□□□ 0.37
Usp54Q8BL06 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp54Q8BL06 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Usp54Q8BL06 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp54Q8BL06 Gm9136-201ENSMUST00000193368 454 ntBASIC17.35■□□□□ 0.37
Usp54Q8BL06 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Usp54Q8BL06 AC113082.1-201ENSMUST00000217324 327 ntBASIC17.35■□□□□ 0.37
Usp54Q8BL06 Gm9661-201ENSMUST00000221611 1122 ntBASIC17.35■□□□□ 0.37
Usp54Q8BL06 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Usp54Q8BL06 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp54Q8BL06 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Usp54Q8BL06 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp54Q8BL06 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp54Q8BL06 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Usp54Q8BL06 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Usp54Q8BL06 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp54Q8BL06 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.35■□□□□ 0.37
Usp54Q8BL06 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Usp54Q8BL06 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp54Q8BL06 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp54Q8BL06 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp54Q8BL06 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp54Q8BL06 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC17.34■□□□□ 0.37
Usp54Q8BL06 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC17.34■□□□□ 0.37
Usp54Q8BL06 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
Usp54Q8BL06 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp54Q8BL06 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp54Q8BL06 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp54Q8BL06 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC17.34■□□□□ 0.37
Usp54Q8BL06 Gm8531-201ENSMUST00000188319 893 ntBASIC17.34■□□□□ 0.37
Usp54Q8BL06 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
Usp54Q8BL06 Gm7940-201ENSMUST00000218195 769 ntBASIC17.34■□□□□ 0.37
Usp54Q8BL06 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp54Q8BL06 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp54Q8BL06 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp54Q8BL06 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp54Q8BL06 Olfr584-201ENSMUST00000098210 964 ntBASIC17.34■□□□□ 0.37
Usp54Q8BL06 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC17.34■□□□□ 0.37
Usp54Q8BL06 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp54Q8BL06 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp54Q8BL06 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp54Q8BL06 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Usp54Q8BL06 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Usp54Q8BL06 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Usp54Q8BL06 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp54Q8BL06 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp54Q8BL06 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp54Q8BL06 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp54Q8BL06 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Usp54Q8BL06 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Usp54Q8BL06 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms