Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cdhr3Q8BL00 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Gm38092-201ENSMUST00000195600 653 ntBASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Gm35960-201ENSMUST00000202712 767 ntBASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Gm4768-201ENSMUST00000206199 686 ntBASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Gm45384-201ENSMUST00000210451 277 ntBASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Gm19163-201ENSMUST00000223313 780 ntBASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Gm10012-201ENSMUST00000078252 192 ntBASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Cdhr3Q8BL00 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Gm23984-201ENSMUST00000157139 203 ntBASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Gm24196-201ENSMUST00000179161 110 ntBASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 AC110817.1-201ENSMUST00000225706 605 ntBASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 AC158982.1-201ENSMUST00000228377 901 ntBASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Gm6180-201ENSMUST00000065243 498 ntBASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Gm24526-201ENSMUST00000082921 158 ntBASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Gm43823-201ENSMUST00000197391 1808 ntBASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cdhr3Q8BL00 Gm9115-201ENSMUST00000120192 1348 ntBASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cdhr3Q8BL00 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms