Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.75□□□□□ -0.53
Clrn3Q8BHH8 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Gm18062-201ENSMUST00000208020 547 ntBASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Gm18055-201ENSMUST00000208254 547 ntBASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Gm32025-201ENSMUST00000217960 307 ntBASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Clrn3Q8BHH8 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Mir1982-201ENSMUST00000157368 74 ntBASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Gm18584-201ENSMUST00000203098 964 ntBASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Snora73a-201ENSMUST00000082453 205 ntBASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Clrn3Q8BHH8 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.72□□□□□ -0.53
Clrn3Q8BHH8 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 380.5 ms