Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Samm50Q8BGH2 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Samm50Q8BGH2 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.59□□□□□ -0.07
Samm50Q8BGH2 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Samm50Q8BGH2 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Samm50Q8BGH2 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Samm50Q8BGH2 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Samm50Q8BGH2 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Samm50Q8BGH2 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Samm50Q8BGH2 AC156031.2-201ENSMUST00000213107 3310 ntBASIC14.59□□□□□ -0.07
Samm50Q8BGH2 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Samm50Q8BGH2 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Samm50Q8BGH2 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Samm50Q8BGH2 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC14.59□□□□□ -0.07
Samm50Q8BGH2 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.59□□□□□ -0.07
Samm50Q8BGH2 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Samm50Q8BGH2 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.59□□□□□ -0.07
Samm50Q8BGH2 Gm37042-201ENSMUST00000193816 581 ntBASIC14.59□□□□□ -0.07
Samm50Q8BGH2 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.59□□□□□ -0.07
Samm50Q8BGH2 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.59□□□□□ -0.07
Samm50Q8BGH2 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Samm50Q8BGH2 Snora73a-201ENSMUST00000082453 205 ntBASIC14.59□□□□□ -0.07
Samm50Q8BGH2 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Samm50Q8BGH2 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Samm50Q8BGH2 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Samm50Q8BGH2 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Samm50Q8BGH2 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Samm50Q8BGH2 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Samm50Q8BGH2 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.59□□□□□ -0.07
Samm50Q8BGH2 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Samm50Q8BGH2 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
Samm50Q8BGH2 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Samm50Q8BGH2 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Samm50Q8BGH2 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Samm50Q8BGH2 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Samm50Q8BGH2 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
Samm50Q8BGH2 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Samm50Q8BGH2 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Samm50Q8BGH2 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Samm50Q8BGH2 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Samm50Q8BGH2 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Samm50Q8BGH2 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.58□□□□□ -0.08
Samm50Q8BGH2 Gm12363-201ENSMUST00000122250 668 ntBASIC14.58□□□□□ -0.08
Samm50Q8BGH2 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Samm50Q8BGH2 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.58□□□□□ -0.08
Samm50Q8BGH2 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.58□□□□□ -0.08
Samm50Q8BGH2 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC14.58□□□□□ -0.08
Samm50Q8BGH2 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.58□□□□□ -0.08
Samm50Q8BGH2 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Samm50Q8BGH2 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
Samm50Q8BGH2 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Samm50Q8BGH2 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Samm50Q8BGH2 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Samm50Q8BGH2 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Samm50Q8BGH2 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Samm50Q8BGH2 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Samm50Q8BGH2 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Samm50Q8BGH2 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Samm50Q8BGH2 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Samm50Q8BGH2 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Samm50Q8BGH2 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Samm50Q8BGH2 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.58□□□□□ -0.08
Samm50Q8BGH2 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Samm50Q8BGH2 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC14.58□□□□□ -0.08
Samm50Q8BGH2 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Samm50Q8BGH2 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Samm50Q8BGH2 Gm44806-201ENSMUST00000205574 2303 ntBASIC14.58□□□□□ -0.08
Samm50Q8BGH2 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Samm50Q8BGH2 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Samm50Q8BGH2 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Samm50Q8BGH2 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Samm50Q8BGH2 AC157950.1-201ENSMUST00000217561 2168 ntBASIC14.57□□□□□ -0.08
Samm50Q8BGH2 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Samm50Q8BGH2 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Samm50Q8BGH2 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Samm50Q8BGH2 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Samm50Q8BGH2 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Samm50Q8BGH2 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Samm50Q8BGH2 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Samm50Q8BGH2 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Samm50Q8BGH2 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.57□□□□□ -0.08
Samm50Q8BGH2 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Samm50Q8BGH2 Gm16379-201ENSMUST00000161469 348 ntBASIC14.57□□□□□ -0.08
Samm50Q8BGH2 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.57□□□□□ -0.08
Samm50Q8BGH2 Gm8762-201ENSMUST00000193486 339 ntBASIC14.57□□□□□ -0.08
Samm50Q8BGH2 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.57□□□□□ -0.08
Samm50Q8BGH2 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Samm50Q8BGH2 Gm26035-201ENSMUST00000083065 308 ntBASIC14.57□□□□□ -0.08
Samm50Q8BGH2 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Samm50Q8BGH2 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Samm50Q8BGH2 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Samm50Q8BGH2 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Samm50Q8BGH2 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Samm50Q8BGH2 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Samm50Q8BGH2 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Samm50Q8BGH2 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Samm50Q8BGH2 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Samm50Q8BGH2 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Samm50Q8BGH2 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Samm50Q8BGH2 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms