Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim50Q810I2 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim50Q810I2 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim50Q810I2 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim50Q810I2 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim50Q810I2 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim50Q810I2 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim50Q810I2 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim50Q810I2 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim50Q810I2 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trim50Q810I2 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim50Q810I2 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim50Q810I2 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim50Q810I2 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.13□□□□□ -0.47
Trim50Q810I2 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.13□□□□□ -0.47
Trim50Q810I2 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim50Q810I2 Gm18054-201ENSMUST00000207539 555 ntBASIC12.13□□□□□ -0.47
Trim50Q810I2 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim50Q810I2 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim50Q810I2 Gm9823-201ENSMUST00000051212 327 ntBASIC12.13□□□□□ -0.47
Trim50Q810I2 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim50Q810I2 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim50Q810I2 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim50Q810I2 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim50Q810I2 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim50Q810I2 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trim50Q810I2 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim50Q810I2 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim50Q810I2 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trim50Q810I2 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim50Q810I2 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim50Q810I2 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim50Q810I2 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim50Q810I2 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim50Q810I2 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim50Q810I2 Paupar-201ENSMUST00000194826 3482 ntBASIC12.13□□□□□ -0.47
Trim50Q810I2 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trim50Q810I2 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.13□□□□□ -0.47
Trim50Q810I2 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trim50Q810I2 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.13□□□□□ -0.47
Trim50Q810I2 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim50Q810I2 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.12□□□□□ -0.47
Trim50Q810I2 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.12□□□□□ -0.47
Trim50Q810I2 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.12□□□□□ -0.47
Trim50Q810I2 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.12□□□□□ -0.47
Trim50Q810I2 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim50Q810I2 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim50Q810I2 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim50Q810I2 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim50Q810I2 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim50Q810I2 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim50Q810I2 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.12□□□□□ -0.47
Trim50Q810I2 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim50Q810I2 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim50Q810I2 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim50Q810I2 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim50Q810I2 Mir1247-201ENSMUST00000116706 82 ntBASIC12.12□□□□□ -0.47
Trim50Q810I2 Gm11793-201ENSMUST00000120433 981 ntBASIC12.12□□□□□ -0.47
Trim50Q810I2 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim50Q810I2 Gm17420-201ENSMUST00000164753 153 ntBASIC12.12□□□□□ -0.47
Trim50Q810I2 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Trim50Q810I2 Gm27572-201ENSMUST00000183702 255 ntBASIC12.12□□□□□ -0.47
Trim50Q810I2 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.12□□□□□ -0.47
Trim50Q810I2 Gm43118-201ENSMUST00000199149 775 ntBASIC12.12□□□□□ -0.47
Trim50Q810I2 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim50Q810I2 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.12□□□□□ -0.47
Trim50Q810I2 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trim50Q810I2 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim50Q810I2 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim50Q810I2 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trim50Q810I2 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim50Q810I2 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.12□□□□□ -0.47
Trim50Q810I2 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.12□□□□□ -0.47
Trim50Q810I2 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim50Q810I2 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim50Q810I2 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.12□□□□□ -0.47
Trim50Q810I2 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim50Q810I2 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim50Q810I2 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim50Q810I2 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim50Q810I2 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim50Q810I2 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trim50Q810I2 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trim50Q810I2 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trim50Q810I2 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim50Q810I2 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.11□□□□□ -0.47
Trim50Q810I2 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trim50Q810I2 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim50Q810I2 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.11□□□□□ -0.47
Trim50Q810I2 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim50Q810I2 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim50Q810I2 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trim50Q810I2 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim50Q810I2 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.11□□□□□ -0.47
Trim50Q810I2 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trim50Q810I2 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.11□□□□□ -0.47
Trim50Q810I2 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim50Q810I2 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim50Q810I2 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trim50Q810I2 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 97.2 ms