Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Usp6nlQ80XC3 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Usp6nlQ80XC3 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Usp6nlQ80XC3 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Usp6nlQ80XC3 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Usp6nlQ80XC3 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Usp6nlQ80XC3 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Usp6nlQ80XC3 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Usp6nlQ80XC3 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Usp6nlQ80XC3 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.75□□□□□ -0.21
Usp6nlQ80XC3 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Usp6nlQ80XC3 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Usp6nlQ80XC3 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Usp6nlQ80XC3 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 H2-Q3-201ENSMUST00000172583 608 ntBASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Gm44958-201ENSMUST00000203734 736 ntBASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Gm21811-201ENSMUST00000096485 930 ntBASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.74□□□□□ -0.21
Usp6nlQ80XC3 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.73□□□□□ -0.21
Usp6nlQ80XC3 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Usp6nlQ80XC3 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Usp6nlQ80XC3 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Usp6nlQ80XC3 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Usp6nlQ80XC3 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Usp6nlQ80XC3 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Usp6nlQ80XC3 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Usp6nlQ80XC3 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.73□□□□□ -0.21
Usp6nlQ80XC3 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Usp6nlQ80XC3 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Usp6nlQ80XC3 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.73□□□□□ -0.21
Usp6nlQ80XC3 Gm23251-201ENSMUST00000103773 110 ntBASIC13.73□□□□□ -0.21
Usp6nlQ80XC3 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.73□□□□□ -0.21
Usp6nlQ80XC3 Gm15782-201ENSMUST00000121073 445 ntBASIC13.73□□□□□ -0.21
Usp6nlQ80XC3 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.73□□□□□ -0.21
Usp6nlQ80XC3 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Usp6nlQ80XC3 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Usp6nlQ80XC3 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Usp6nlQ80XC3 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Usp6nlQ80XC3 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Usp6nlQ80XC3 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC13.73□□□□□ -0.21
Usp6nlQ80XC3 AC125486.1-201ENSMUST00000218701 320 ntBASIC13.73□□□□□ -0.21
Usp6nlQ80XC3 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.73□□□□□ -0.21
Usp6nlQ80XC3 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC13.73□□□□□ -0.21
Usp6nlQ80XC3 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Usp6nlQ80XC3 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.73□□□□□ -0.21
Usp6nlQ80XC3 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Usp6nlQ80XC3 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Usp6nlQ80XC3 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Usp6nlQ80XC3 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
Usp6nlQ80XC3 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC13.73□□□□□ -0.21
Usp6nlQ80XC3 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Usp6nlQ80XC3 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Usp6nlQ80XC3 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Usp6nlQ80XC3 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Usp6nlQ80XC3 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Usp6nlQ80XC3 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms