Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vrk1Q80X41 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vrk1Q80X41 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Vrk1Q80X41 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vrk1Q80X41 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vrk1Q80X41 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vrk1Q80X41 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vrk1Q80X41 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vrk1Q80X41 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Vrk1Q80X41 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.91□□□□□ -0.5
Vrk1Q80X41 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Vrk1Q80X41 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vrk1Q80X41 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vrk1Q80X41 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vrk1Q80X41 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vrk1Q80X41 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vrk1Q80X41 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vrk1Q80X41 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vrk1Q80X41 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vrk1Q80X41 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vrk1Q80X41 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Vrk1Q80X41 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.91□□□□□ -0.5
Vrk1Q80X41 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Vrk1Q80X41 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.91□□□□□ -0.5
Vrk1Q80X41 Gm11597-201ENSMUST00000121423 964 ntBASIC11.91□□□□□ -0.5
Vrk1Q80X41 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vrk1Q80X41 Gm24749-201ENSMUST00000157838 343 ntBASIC11.91□□□□□ -0.5
Vrk1Q80X41 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.91□□□□□ -0.5
Vrk1Q80X41 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.91□□□□□ -0.5
Vrk1Q80X41 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.91□□□□□ -0.5
Vrk1Q80X41 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.91□□□□□ -0.5
Vrk1Q80X41 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vrk1Q80X41 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vrk1Q80X41 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vrk1Q80X41 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vrk1Q80X41 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.91□□□□□ -0.5
Vrk1Q80X41 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.91□□□□□ -0.5
Vrk1Q80X41 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vrk1Q80X41 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vrk1Q80X41 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vrk1Q80X41 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vrk1Q80X41 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.91□□□□□ -0.5
Vrk1Q80X41 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.91□□□□□ -0.5
Vrk1Q80X41 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vrk1Q80X41 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vrk1Q80X41 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vrk1Q80X41 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Gm12314-201ENSMUST00000118104 538 ntBASIC11.9□□□□□ -0.5
Vrk1Q80X41 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Gm11331-201ENSMUST00000119764 288 ntBASIC11.9□□□□□ -0.5
Vrk1Q80X41 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Gm7003-201ENSMUST00000195089 312 ntBASIC11.9□□□□□ -0.5
Vrk1Q80X41 Gm43947-201ENSMUST00000203019 959 ntBASIC11.9□□□□□ -0.5
Vrk1Q80X41 Gm17812-201ENSMUST00000204935 318 ntBASIC11.9□□□□□ -0.5
Vrk1Q80X41 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
Vrk1Q80X41 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.9□□□□□ -0.5
Vrk1Q80X41 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vrk1Q80X41 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.9□□□□□ -0.5
Vrk1Q80X41 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.9□□□□□ -0.5
Vrk1Q80X41 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vrk1Q80X41 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vrk1Q80X41 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Vrk1Q80X41 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.9□□□□□ -0.51
Vrk1Q80X41 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms