Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.11□□□□□ -0.31
Prpf38bQ80SY5 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Gm44086-201ENSMUST00000203251 2349 ntBASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Gm26185-201ENSMUST00000157692 266 ntBASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Mir6958-201ENSMUST00000184207 73 ntBASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Prpf38bQ80SY5 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 Gm16202-201ENSMUST00000117532 544 ntBASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 Gm12266-201ENSMUST00000120311 962 ntBASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 Gm44126-201ENSMUST00000204831 514 ntBASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 AC125117.2-201ENSMUST00000228344 1140 ntBASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Prpf38bQ80SY5 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms