Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx55Q6ZPL9 Mir7076-201ENSMUST00000183519 74 ntBASIC14.11□□□□□ -0.15
Ddx55Q6ZPL9 Gm28686-201ENSMUST00000187404 609 ntBASIC14.11□□□□□ -0.15
Ddx55Q6ZPL9 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC14.11□□□□□ -0.15
Ddx55Q6ZPL9 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx55Q6ZPL9 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC14.11□□□□□ -0.15
Ddx55Q6ZPL9 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC14.11□□□□□ -0.15
Ddx55Q6ZPL9 Gm9797-202ENSMUST00000218003 294 ntBASIC14.11□□□□□ -0.15
Ddx55Q6ZPL9 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx55Q6ZPL9 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx55Q6ZPL9 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx55Q6ZPL9 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.11□□□□□ -0.15
Ddx55Q6ZPL9 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx55Q6ZPL9 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx55Q6ZPL9 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx55Q6ZPL9 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx55Q6ZPL9 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ddx55Q6ZPL9 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 Gm12164-201ENSMUST00000121695 551 ntBASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 Mir1901-201ENSMUST00000122616 78 ntBASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 Gm5852-201ENSMUST00000194119 1021 ntBASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 Gm5542-201ENSMUST00000195485 1089 ntBASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 Gm18711-201ENSMUST00000199341 750 ntBASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 Gm2517-201ENSMUST00000215651 348 ntBASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 AC158355.1-201ENSMUST00000215895 1705 ntBASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ddx55Q6ZPL9 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx55Q6ZPL9 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx55Q6ZPL9 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx55Q6ZPL9 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Ddx55Q6ZPL9 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx55Q6ZPL9 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx55Q6ZPL9 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Ddx55Q6ZPL9 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx55Q6ZPL9 Gm11663-201ENSMUST00000117888 290 ntBASIC14.09□□□□□ -0.15
Ddx55Q6ZPL9 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC14.09□□□□□ -0.15
Ddx55Q6ZPL9 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC14.09□□□□□ -0.15
Ddx55Q6ZPL9 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC14.09□□□□□ -0.15
Ddx55Q6ZPL9 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC14.09□□□□□ -0.15
Ddx55Q6ZPL9 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC14.09□□□□□ -0.15
Ddx55Q6ZPL9 AC099645.1-201ENSMUST00000226476 1105 ntBASIC14.09□□□□□ -0.15
Ddx55Q6ZPL9 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC14.09□□□□□ -0.15
Ddx55Q6ZPL9 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx55Q6ZPL9 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx55Q6ZPL9 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx55Q6ZPL9 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Ddx55Q6ZPL9 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx55Q6ZPL9 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx55Q6ZPL9 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx55Q6ZPL9 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
Ddx55Q6ZPL9 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ddx55Q6ZPL9 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ddx55Q6ZPL9 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.09□□□□□ -0.15
Ddx55Q6ZPL9 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx55Q6ZPL9 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ddx55Q6ZPL9 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.09□□□□□ -0.15
Ddx55Q6ZPL9 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx55Q6ZPL9 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx55Q6ZPL9 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ddx55Q6ZPL9 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.08□□□□□ -0.15
Ddx55Q6ZPL9 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ddx55Q6ZPL9 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ddx55Q6ZPL9 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ddx55Q6ZPL9 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Ddx55Q6ZPL9 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ddx55Q6ZPL9 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC14.08□□□□□ -0.15
Ddx55Q6ZPL9 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx55Q6ZPL9 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx55Q6ZPL9 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ddx55Q6ZPL9 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms