Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Gm24136-201ENSMUST00000083374 165 ntBASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Scaf4Q6PFF0 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Gm8213-201ENSMUST00000118191 441 ntBASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Gm27331-201ENSMUST00000183705 60 ntBASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Scaf4Q6PFF0 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Gm2231-201ENSMUST00000125661 612 ntBASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Gm9022-201ENSMUST00000182482 992 ntBASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Gm32025-201ENSMUST00000217960 307 ntBASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Scaf4Q6PFF0 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms