Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Gm37691-201ENSMUST00000192147 2573 ntBASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Gm12795-201ENSMUST00000117594 539 ntBASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Mup-ps26-201ENSMUST00000121751 202 ntBASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Gm6397-201ENSMUST00000161973 1069 ntBASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Gm9358-201ENSMUST00000183067 927 ntBASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Gm4157-201ENSMUST00000211647 679 ntBASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 CT485607.1-201ENSMUST00000216100 85 ntBASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 AC153954.1-201ENSMUST00000216959 255 ntBASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 AC122408.1-201ENSMUST00000218949 218 ntBASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Gm10288-201ENSMUST00000084614 537 ntBASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Gm7551-201ENSMUST00000089593 1074 ntBASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Snrnp40Q6PE01 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 AC154262.2-201ENSMUST00000224310 2293 ntBASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 CT030684.3-201ENSMUST00000227308 2445 ntBASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Gm12857-201ENSMUST00000117678 592 ntBASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Gm13809-201ENSMUST00000117921 597 ntBASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Gm14314-201ENSMUST00000118225 1015 ntBASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Gm14724-201ENSMUST00000118400 537 ntBASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Gm29155-201ENSMUST00000185910 269 ntBASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Gm38210-201ENSMUST00000191944 809 ntBASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Gm2965-201ENSMUST00000198365 343 ntBASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Gm9463-201ENSMUST00000206707 601 ntBASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Gm45909-201ENSMUST00000212413 1031 ntBASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 AC132901.1-201ENSMUST00000224345 508 ntBASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC10.92□□□□□ -0.66
Snrnp40Q6PE01 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms